Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Gm7541-201ENSMUST00000118361 535 ntBASIC13.3□□□□□ -0.28
Smc1bQ920F6 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Smc1bQ920F6 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC13.3□□□□□ -0.28
Smc1bQ920F6 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC13.3□□□□□ -0.28
Smc1bQ920F6 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Smc1bQ920F6 Gm5714-201ENSMUST00000197343 566 ntBASIC13.3□□□□□ -0.28
Smc1bQ920F6 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC13.3□□□□□ -0.28
Smc1bQ920F6 Gm18059-201ENSMUST00000208073 580 ntBASIC13.3□□□□□ -0.28
Smc1bQ920F6 AC136376.2-201ENSMUST00000228819 490 ntBASIC13.3□□□□□ -0.28
Smc1bQ920F6 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Smc1bQ920F6 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smc1bQ920F6 Gm23680-201ENSMUST00000083162 164 ntBASIC13.3□□□□□ -0.28
Smc1bQ920F6 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Smc1bQ920F6 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Smc1bQ920F6 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Smc1bQ920F6 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smc1bQ920F6 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smc1bQ920F6 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smc1bQ920F6 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC13.3□□□□□ -0.28
Smc1bQ920F6 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smc1bQ920F6 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smc1bQ920F6 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC13.3□□□□□ -0.28
Smc1bQ920F6 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smc1bQ920F6 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Smc1bQ920F6 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC13.3□□□□□ -0.28
Smc1bQ920F6 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smc1bQ920F6 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
Smc1bQ920F6 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smc1bQ920F6 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC13.3□□□□□ -0.28
Smc1bQ920F6 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smc1bQ920F6 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Smc1bQ920F6 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smc1bQ920F6 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Smc1bQ920F6 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smc1bQ920F6 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smc1bQ920F6 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Smc1bQ920F6 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smc1bQ920F6 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Smc1bQ920F6 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Smc1bQ920F6 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Smc1bQ920F6 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Smc1bQ920F6 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smc1bQ920F6 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smc1bQ920F6 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Smc1bQ920F6 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smc1bQ920F6 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smc1bQ920F6 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC13.29□□□□□ -0.28
Smc1bQ920F6 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smc1bQ920F6 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Smc1bQ920F6 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smc1bQ920F6 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smc1bQ920F6 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smc1bQ920F6 Gng12-205ENSMUST00000114226 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smc1bQ920F6 Gm11422-201ENSMUST00000118925 1103 ntBASIC13.29□□□□□ -0.28
Smc1bQ920F6 Gm5257-201ENSMUST00000121823 790 ntBASIC13.29□□□□□ -0.28
Smc1bQ920F6 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC13.29□□□□□ -0.28
Smc1bQ920F6 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
Smc1bQ920F6 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC13.29□□□□□ -0.28
Smc1bQ920F6 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC13.29□□□□□ -0.28
Smc1bQ920F6 Zfp637-210ENSMUST00000164472 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smc1bQ920F6 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC13.29□□□□□ -0.28
Smc1bQ920F6 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC13.29□□□□□ -0.28
Smc1bQ920F6 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Smc1bQ920F6 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Smc1bQ920F6 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC13.29□□□□□ -0.28
Smc1bQ920F6 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC13.29□□□□□ -0.28
Smc1bQ920F6 AC102368.1-201ENSMUST00000227161 892 ntBASIC13.29□□□□□ -0.28
Smc1bQ920F6 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smc1bQ920F6 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smc1bQ920F6 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smc1bQ920F6 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Smc1bQ920F6 Gm43267-201ENSMUST00000199664 1796 ntBASIC13.29□□□□□ -0.28
Smc1bQ920F6 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smc1bQ920F6 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smc1bQ920F6 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
Smc1bQ920F6 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smc1bQ920F6 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smc1bQ920F6 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Smc1bQ920F6 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Smc1bQ920F6 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Smc1bQ920F6 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smc1bQ920F6 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Smc1bQ920F6 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Smc1bQ920F6 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smc1bQ920F6 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smc1bQ920F6 AC211878.3-201ENSMUST00000222629 2018 ntBASIC13.29□□□□□ -0.28
Smc1bQ920F6 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Smc1bQ920F6 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smc1bQ920F6 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smc1bQ920F6 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smc1bQ920F6 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC13.28□□□□□ -0.28
Smc1bQ920F6 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smc1bQ920F6 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Smc1bQ920F6 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC13.28□□□□□ -0.28
Smc1bQ920F6 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Smc1bQ920F6 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smc1bQ920F6 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smc1bQ920F6 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smc1bQ920F6 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smc1bQ920F6 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms