Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdha3Q91Y16 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdha3Q91Y16 Gm37835-201ENSMUST00000193305 361 ntBASIC12.01□□□□□ -0.49
Pcdha3Q91Y16 Gm45113-201ENSMUST00000207518 165 ntBASIC12.01□□□□□ -0.49
Pcdha3Q91Y16 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC12.01□□□□□ -0.49
Pcdha3Q91Y16 AC112945.1-201ENSMUST00000226413 514 ntBASIC12.01□□□□□ -0.49
Pcdha3Q91Y16 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdha3Q91Y16 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdha3Q91Y16 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Pcdha3Q91Y16 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Pcdha3Q91Y16 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdha3Q91Y16 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdha3Q91Y16 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdha3Q91Y16 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Pcdha3Q91Y16 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdha3Q91Y16 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdha3Q91Y16 Rgr-203ENSMUST00000225070 4704 ntBASIC12.01□□□□□ -0.49
Pcdha3Q91Y16 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdha3Q91Y16 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdha3Q91Y16 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdha3Q91Y16 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Pcdha3Q91Y16 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Pcdha3Q91Y16 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdha3Q91Y16 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdha3Q91Y16 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC12.01□□□□□ -0.49
Pcdha3Q91Y16 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdha3Q91Y16 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdha3Q91Y16 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdha3Q91Y16 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdha3Q91Y16 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Pcdha3Q91Y16 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Pcdha3Q91Y16 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdha3Q91Y16 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdha3Q91Y16 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdha3Q91Y16 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdha3Q91Y16 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdha3Q91Y16 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC12□□□□□ -0.49
Pcdha3Q91Y16 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Pcdha3Q91Y16 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC12□□□□□ -0.49
Pcdha3Q91Y16 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdha3Q91Y16 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdha3Q91Y16 BC043934-202ENSMUST00000185694 2356 ntBASIC12□□□□□ -0.49
Pcdha3Q91Y16 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Pcdha3Q91Y16 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdha3Q91Y16 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Pcdha3Q91Y16 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdha3Q91Y16 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdha3Q91Y16 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdha3Q91Y16 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdha3Q91Y16 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdha3Q91Y16 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdha3Q91Y16 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC12□□□□□ -0.49
Pcdha3Q91Y16 Gm12579-201ENSMUST00000118040 783 ntBASIC12□□□□□ -0.49
Pcdha3Q91Y16 Gm8731-201ENSMUST00000118088 412 ntBASIC12□□□□□ -0.49
Pcdha3Q91Y16 Gm15595-201ENSMUST00000120840 961 ntBASIC12□□□□□ -0.49
Pcdha3Q91Y16 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC12□□□□□ -0.49
Pcdha3Q91Y16 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC12□□□□□ -0.49
Pcdha3Q91Y16 Gm10051-201ENSMUST00000145209 414 ntBASIC12□□□□□ -0.49
Pcdha3Q91Y16 Gm7666-201ENSMUST00000146631 819 ntBASIC12□□□□□ -0.49
Pcdha3Q91Y16 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC12□□□□□ -0.49
Pcdha3Q91Y16 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC12□□□□□ -0.49
Pcdha3Q91Y16 Mir7686-201ENSMUST00000200604 57 ntBASIC12□□□□□ -0.49
Pcdha3Q91Y16 Gm9555-201ENSMUST00000200908 583 ntBASIC12□□□□□ -0.49
Pcdha3Q91Y16 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC12□□□□□ -0.49
Pcdha3Q91Y16 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC12□□□□□ -0.49
Pcdha3Q91Y16 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC12□□□□□ -0.49
Pcdha3Q91Y16 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdha3Q91Y16 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdha3Q91Y16 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC12□□□□□ -0.49
Pcdha3Q91Y16 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC12□□□□□ -0.49
Pcdha3Q91Y16 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdha3Q91Y16 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdha3Q91Y16 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdha3Q91Y16 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Pcdha3Q91Y16 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdha3Q91Y16 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdha3Q91Y16 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdha3Q91Y16 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdha3Q91Y16 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdha3Q91Y16 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdha3Q91Y16 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC12□□□□□ -0.49
Pcdha3Q91Y16 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdha3Q91Y16 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdha3Q91Y16 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdha3Q91Y16 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Pcdha3Q91Y16 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdha3Q91Y16 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdha3Q91Y16 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdha3Q91Y16 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdha3Q91Y16 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC11.99□□□□□ -0.49
Pcdha3Q91Y16 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdha3Q91Y16 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdha3Q91Y16 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdha3Q91Y16 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdha3Q91Y16 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdha3Q91Y16 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdha3Q91Y16 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdha3Q91Y16 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdha3Q91Y16 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdha3Q91Y16 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms