Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhb1Q91Y08 Gm45856-201ENSMUST00000212752 416 ntBASIC11.9□□□□□ -0.5
Pcdhb1Q91Y08 Gm19208-201ENSMUST00000213861 912 ntBASIC11.9□□□□□ -0.5
Pcdhb1Q91Y08 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC11.9□□□□□ -0.5
Pcdhb1Q91Y08 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhb1Q91Y08 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhb1Q91Y08 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhb1Q91Y08 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhb1Q91Y08 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Pcdhb1Q91Y08 Gm7551-201ENSMUST00000089593 1074 ntBASIC11.9□□□□□ -0.5
Pcdhb1Q91Y08 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhb1Q91Y08 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhb1Q91Y08 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Pcdhb1Q91Y08 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhb1Q91Y08 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhb1Q91Y08 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Pcdhb1Q91Y08 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC11.9□□□□□ -0.5
Pcdhb1Q91Y08 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhb1Q91Y08 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhb1Q91Y08 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhb1Q91Y08 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhb1Q91Y08 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhb1Q91Y08 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhb1Q91Y08 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC11.9□□□□□ -0.51
Pcdhb1Q91Y08 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.51
Pcdhb1Q91Y08 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Pcdhb1Q91Y08 Gm21939-201ENSMUST00000221137 2773 ntBASIC11.9□□□□□ -0.51
Pcdhb1Q91Y08 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb1Q91Y08 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb1Q91Y08 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Pcdhb1Q91Y08 Gm43289-201ENSMUST00000200537 1475 ntBASIC11.89□□□□□ -0.51
Pcdhb1Q91Y08 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb1Q91Y08 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb1Q91Y08 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Pcdhb1Q91Y08 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC11.89□□□□□ -0.51
Pcdhb1Q91Y08 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb1Q91Y08 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb1Q91Y08 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb1Q91Y08 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb1Q91Y08 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Pcdhb1Q91Y08 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb1Q91Y08 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb1Q91Y08 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb1Q91Y08 Gm22711-201ENSMUST00000116890 133 ntBASIC11.89□□□□□ -0.51
Pcdhb1Q91Y08 Gm4909-201ENSMUST00000118749 794 ntBASIC11.89□□□□□ -0.51
Pcdhb1Q91Y08 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC11.89□□□□□ -0.51
Pcdhb1Q91Y08 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
Pcdhb1Q91Y08 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb1Q91Y08 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb1Q91Y08 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC11.89□□□□□ -0.51
Pcdhb1Q91Y08 Gm5732-201ENSMUST00000182596 1007 ntBASIC11.89□□□□□ -0.51
Pcdhb1Q91Y08 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC11.89□□□□□ -0.51
Pcdhb1Q91Y08 Gm37835-201ENSMUST00000193305 361 ntBASIC11.89□□□□□ -0.51
Pcdhb1Q91Y08 Gm7504-201ENSMUST00000201449 424 ntBASIC11.89□□□□□ -0.51
Pcdhb1Q91Y08 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC11.89□□□□□ -0.51
Pcdhb1Q91Y08 Gm5996-201ENSMUST00000211110 718 ntBASIC11.89□□□□□ -0.51
Pcdhb1Q91Y08 Gm1821-202ENSMUST00000227415 750 ntBASIC11.89□□□□□ -0.51
Pcdhb1Q91Y08 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb1Q91Y08 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Pcdhb1Q91Y08 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Pcdhb1Q91Y08 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb1Q91Y08 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb1Q91Y08 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb1Q91Y08 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb1Q91Y08 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb1Q91Y08 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb1Q91Y08 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb1Q91Y08 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb1Q91Y08 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb1Q91Y08 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Pcdhb1Q91Y08 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Pcdhb1Q91Y08 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb1Q91Y08 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb1Q91Y08 CT009489.1-201ENSMUST00000227740 1893 ntBASIC11.89□□□□□ -0.51
Pcdhb1Q91Y08 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb1Q91Y08 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb1Q91Y08 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb1Q91Y08 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Pcdhb1Q91Y08 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC11.89□□□□□ -0.51
Pcdhb1Q91Y08 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhb1Q91Y08 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Pcdhb1Q91Y08 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhb1Q91Y08 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhb1Q91Y08 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhb1Q91Y08 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhb1Q91Y08 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Pcdhb1Q91Y08 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhb1Q91Y08 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhb1Q91Y08 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhb1Q91Y08 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhb1Q91Y08 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhb1Q91Y08 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Pcdhb1Q91Y08 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhb1Q91Y08 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhb1Q91Y08 Gm22920-201ENSMUST00000102175 109 ntBASIC11.88□□□□□ -0.51
Pcdhb1Q91Y08 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC11.88□□□□□ -0.51
Pcdhb1Q91Y08 Gm12129-201ENSMUST00000120104 1147 ntBASIC11.88□□□□□ -0.51
Pcdhb1Q91Y08 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC11.88□□□□□ -0.51
Pcdhb1Q91Y08 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC11.88□□□□□ -0.51
Pcdhb1Q91Y08 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms