Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trex1Q91XB0 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trex1Q91XB0 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trex1Q91XB0 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trex1Q91XB0 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trex1Q91XB0 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trex1Q91XB0 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Trex1Q91XB0 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trex1Q91XB0 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trex1Q91XB0 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC13.09□□□□□ -0.31
Trex1Q91XB0 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trex1Q91XB0 Gm9244-201ENSMUST00000056767 2129 ntBASIC13.09□□□□□ -0.31
Trex1Q91XB0 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
Trex1Q91XB0 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Trex1Q91XB0 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Trex1Q91XB0 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trex1Q91XB0 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trex1Q91XB0 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trex1Q91XB0 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC13.09□□□□□ -0.31
Trex1Q91XB0 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Trex1Q91XB0 Gm14213-201ENSMUST00000119778 768 ntBASIC13.09□□□□□ -0.31
Trex1Q91XB0 Mir1905-201ENSMUST00000122779 82 ntBASIC13.09□□□□□ -0.31
Trex1Q91XB0 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trex1Q91XB0 Gm25830-201ENSMUST00000158923 132 ntBASIC13.09□□□□□ -0.31
Trex1Q91XB0 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trex1Q91XB0 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC13.09□□□□□ -0.31
Trex1Q91XB0 Gm43966-201ENSMUST00000203301 612 ntBASIC13.09□□□□□ -0.31
Trex1Q91XB0 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trex1Q91XB0 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trex1Q91XB0 Id2-203ENSMUST00000222667 958 ntBASIC13.09□□□□□ -0.31
Trex1Q91XB0 Nupl1-206ENSMUST00000225111 2936 ntBASIC13.09□□□□□ -0.31
Trex1Q91XB0 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trex1Q91XB0 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trex1Q91XB0 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trex1Q91XB0 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trex1Q91XB0 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Trex1Q91XB0 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Trex1Q91XB0 Matn2-203ENSMUST00000226766 3252 ntBASIC13.09□□□□□ -0.31
Trex1Q91XB0 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trex1Q91XB0 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trex1Q91XB0 Erich3-203ENSMUST00000189969 3460 ntBASIC13.09□□□□□ -0.31
Trex1Q91XB0 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC13.09□□□□□ -0.31
Trex1Q91XB0 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC13.09□□□□□ -0.31
Trex1Q91XB0 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trex1Q91XB0 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trex1Q91XB0 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Trex1Q91XB0 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trex1Q91XB0 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trex1Q91XB0 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trex1Q91XB0 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Trex1Q91XB0 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trex1Q91XB0 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Trex1Q91XB0 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trex1Q91XB0 Gm7104-201ENSMUST00000179741 2532 ntBASIC13.08□□□□□ -0.32
Trex1Q91XB0 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Trex1Q91XB0 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trex1Q91XB0 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Trex1Q91XB0 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
Trex1Q91XB0 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trex1Q91XB0 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trex1Q91XB0 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trex1Q91XB0 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC13.08□□□□□ -0.32
Trex1Q91XB0 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trex1Q91XB0 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC13.08□□□□□ -0.32
Trex1Q91XB0 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC13.08□□□□□ -0.32
Trex1Q91XB0 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC13.08□□□□□ -0.32
Trex1Q91XB0 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC13.08□□□□□ -0.32
Trex1Q91XB0 Gm19246-201ENSMUST00000173599 255 ntBASIC13.08□□□□□ -0.32
Trex1Q91XB0 Gm24809-201ENSMUST00000175318 271 ntBASIC13.08□□□□□ -0.32
Trex1Q91XB0 Gm26976-201ENSMUST00000182929 908 ntBASIC13.08□□□□□ -0.32
Trex1Q91XB0 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trex1Q91XB0 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trex1Q91XB0 Gm37365-201ENSMUST00000193109 409 ntBASIC13.08□□□□□ -0.32
Trex1Q91XB0 Gm44216-201ENSMUST00000203942 157 ntBASIC13.08□□□□□ -0.32
Trex1Q91XB0 AC122024.3-201ENSMUST00000217719 294 ntBASIC13.08□□□□□ -0.32
Trex1Q91XB0 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC13.08□□□□□ -0.32
Trex1Q91XB0 CT573086.4-201ENSMUST00000226729 342 ntBASIC13.08□□□□□ -0.32
Trex1Q91XB0 AC130477.1-201ENSMUST00000226982 420 ntBASIC13.08□□□□□ -0.32
Trex1Q91XB0 Gm8325-201ENSMUST00000099086 453 ntBASIC13.08□□□□□ -0.32
Trex1Q91XB0 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trex1Q91XB0 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trex1Q91XB0 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trex1Q91XB0 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trex1Q91XB0 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trex1Q91XB0 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trex1Q91XB0 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trex1Q91XB0 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trex1Q91XB0 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC13.08□□□□□ -0.32
Trex1Q91XB0 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trex1Q91XB0 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trex1Q91XB0 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trex1Q91XB0 Gm5308-201ENSMUST00000196752 1354 ntBASIC13.07□□□□□ -0.32
Trex1Q91XB0 Gm9544-201ENSMUST00000223349 2482 ntBASIC13.07□□□□□ -0.32
Trex1Q91XB0 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC13.07□□□□□ -0.32
Trex1Q91XB0 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trex1Q91XB0 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trex1Q91XB0 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Trex1Q91XB0 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trex1Q91XB0 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trex1Q91XB0 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms