Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Gm37859-201ENSMUST00000195529 2173 ntBASIC12.35□□□□□ -0.43
TraipQ8VIG6 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TraipQ8VIG6 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TraipQ8VIG6 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TraipQ8VIG6 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TraipQ8VIG6 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TraipQ8VIG6 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
TraipQ8VIG6 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TraipQ8VIG6 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TraipQ8VIG6 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TraipQ8VIG6 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TraipQ8VIG6 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TraipQ8VIG6 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TraipQ8VIG6 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
TraipQ8VIG6 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC12.34□□□□□ -0.43
TraipQ8VIG6 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
TraipQ8VIG6 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC12.34□□□□□ -0.43
TraipQ8VIG6 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
TraipQ8VIG6 Gm15782-201ENSMUST00000121073 445 ntBASIC12.34□□□□□ -0.43
TraipQ8VIG6 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC12.34□□□□□ -0.43
TraipQ8VIG6 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC12.34□□□□□ -0.43
TraipQ8VIG6 Gm17709-201ENSMUST00000174536 1096 ntBASIC12.34□□□□□ -0.43
TraipQ8VIG6 Gm25072-201ENSMUST00000175233 235 ntBASIC12.34□□□□□ -0.43
TraipQ8VIG6 Gm29164-201ENSMUST00000185454 1024 ntBASIC12.34□□□□□ -0.43
TraipQ8VIG6 Gm5100-201ENSMUST00000195631 589 ntBASIC12.34□□□□□ -0.43
TraipQ8VIG6 Gm37973-201ENSMUST00000195767 1289 ntBASIC12.34□□□□□ -0.43
TraipQ8VIG6 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TraipQ8VIG6 Gm45856-201ENSMUST00000212752 416 ntBASIC12.34□□□□□ -0.43
TraipQ8VIG6 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TraipQ8VIG6 Gm6653-201ENSMUST00000218063 1288 ntBASIC12.34□□□□□ -0.43
TraipQ8VIG6 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
TraipQ8VIG6 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
TraipQ8VIG6 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TraipQ8VIG6 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
TraipQ8VIG6 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
TraipQ8VIG6 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TraipQ8VIG6 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TraipQ8VIG6 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TraipQ8VIG6 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.34□□□□□ -0.43
TraipQ8VIG6 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TraipQ8VIG6 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TraipQ8VIG6 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
TraipQ8VIG6 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
TraipQ8VIG6 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TraipQ8VIG6 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TraipQ8VIG6 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC12.34□□□□□ -0.43
TraipQ8VIG6 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TraipQ8VIG6 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
TraipQ8VIG6 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TraipQ8VIG6 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TraipQ8VIG6 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC12.33□□□□□ -0.44
TraipQ8VIG6 Gm14740-201ENSMUST00000118538 1150 ntBASIC12.33□□□□□ -0.44
TraipQ8VIG6 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC12.33□□□□□ -0.44
TraipQ8VIG6 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
TraipQ8VIG6 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC12.33□□□□□ -0.44
TraipQ8VIG6 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC12.33□□□□□ -0.44
TraipQ8VIG6 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TraipQ8VIG6 Gm24239-201ENSMUST00000157791 255 ntBASIC12.33□□□□□ -0.44
TraipQ8VIG6 Gm25554-201ENSMUST00000158075 113 ntBASIC12.33□□□□□ -0.44
TraipQ8VIG6 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TraipQ8VIG6 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TraipQ8VIG6 Gm19015-201ENSMUST00000184002 1189 ntBASIC12.33□□□□□ -0.44
TraipQ8VIG6 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC12.33□□□□□ -0.44
TraipQ8VIG6 Gm43830-201ENSMUST00000198760 1067 ntBASIC12.33□□□□□ -0.44
TraipQ8VIG6 Gm43124-201ENSMUST00000201878 278 ntBASIC12.33□□□□□ -0.44
TraipQ8VIG6 Gm43966-201ENSMUST00000203301 612 ntBASIC12.33□□□□□ -0.44
TraipQ8VIG6 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC12.33□□□□□ -0.44
TraipQ8VIG6 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
TraipQ8VIG6 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC12.33□□□□□ -0.44
TraipQ8VIG6 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC12.33□□□□□ -0.44
TraipQ8VIG6 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TraipQ8VIG6 CT025552.1-201ENSMUST00000224561 521 ntBASIC12.33□□□□□ -0.44
TraipQ8VIG6 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
TraipQ8VIG6 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TraipQ8VIG6 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
TraipQ8VIG6 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TraipQ8VIG6 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
TraipQ8VIG6 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC12.33□□□□□ -0.44
TraipQ8VIG6 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
TraipQ8VIG6 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TraipQ8VIG6 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
TraipQ8VIG6 Gm9415-201ENSMUST00000200462 1321 ntBASIC12.33□□□□□ -0.44
TraipQ8VIG6 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TraipQ8VIG6 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TraipQ8VIG6 Gm42478-201ENSMUST00000199252 1467 ntBASIC12.33□□□□□ -0.44
TraipQ8VIG6 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC12.33□□□□□ -0.44
TraipQ8VIG6 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TraipQ8VIG6 Gm44080-201ENSMUST00000204451 2214 ntBASIC12.33□□□□□ -0.44
TraipQ8VIG6 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
TraipQ8VIG6 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
TraipQ8VIG6 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TraipQ8VIG6 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TraipQ8VIG6 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
TraipQ8VIG6 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TraipQ8VIG6 Gm18986-201ENSMUST00000216029 1986 ntBASIC12.32□□□□□ -0.44
TraipQ8VIG6 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TraipQ8VIG6 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
TraipQ8VIG6 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TraipQ8VIG6 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
TraipQ8VIG6 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms