Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Nup35Q8R4R6 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Nup35Q8R4R6 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Nup35Q8R4R6 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Nup35Q8R4R6 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Nup35Q8R4R6 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC9.32□□□□□ -0.92
Nup35Q8R4R6 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Nup35Q8R4R6 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC9.32□□□□□ -0.92
Nup35Q8R4R6 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Nup35Q8R4R6 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Nup35Q8R4R6 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Nup35Q8R4R6 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Nup35Q8R4R6 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC9.32□□□□□ -0.92
Nup35Q8R4R6 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Nup35Q8R4R6 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC9.32□□□□□ -0.92
Nup35Q8R4R6 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC9.32□□□□□ -0.92
Nup35Q8R4R6 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Nup35Q8R4R6 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Nup35Q8R4R6 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC9.31□□□□□ -0.92
Nup35Q8R4R6 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Nup35Q8R4R6 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Nup35Q8R4R6 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Nup35Q8R4R6 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Nup35Q8R4R6 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC9.31□□□□□ -0.92
Nup35Q8R4R6 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC9.31□□□□□ -0.92
Nup35Q8R4R6 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Nup35Q8R4R6 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Nup35Q8R4R6 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Nup35Q8R4R6 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC9.31□□□□□ -0.92
Nup35Q8R4R6 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC9.31□□□□□ -0.92
Nup35Q8R4R6 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Nup35Q8R4R6 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC9.31□□□□□ -0.92
Nup35Q8R4R6 Gm15547-201ENSMUST00000122152 333 ntBASIC9.31□□□□□ -0.92
Nup35Q8R4R6 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC9.31□□□□□ -0.92
Nup35Q8R4R6 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC9.31□□□□□ -0.92
Nup35Q8R4R6 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC9.31□□□□□ -0.92
Nup35Q8R4R6 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC9.31□□□□□ -0.92
Nup35Q8R4R6 Gm6963-201ENSMUST00000147879 379 ntBASIC9.31□□□□□ -0.92
Nup35Q8R4R6 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC9.31□□□□□ -0.92
Nup35Q8R4R6 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC9.31□□□□□ -0.92
Nup35Q8R4R6 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Nup35Q8R4R6 Gm5070-201ENSMUST00000177599 862 ntBASIC9.31□□□□□ -0.92
Nup35Q8R4R6 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Nup35Q8R4R6 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC9.31□□□□□ -0.92
Nup35Q8R4R6 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC9.31□□□□□ -0.92
Nup35Q8R4R6 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC9.31□□□□□ -0.92
Nup35Q8R4R6 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Nup35Q8R4R6 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Nup35Q8R4R6 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC9.31□□□□□ -0.92
Nup35Q8R4R6 Gm7046-201ENSMUST00000221351 977 ntBASIC9.31□□□□□ -0.92
Nup35Q8R4R6 AC133598.1-201ENSMUST00000224327 660 ntBASIC9.31□□□□□ -0.92
Nup35Q8R4R6 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Nup35Q8R4R6 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Nup35Q8R4R6 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Nup35Q8R4R6 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Nup35Q8R4R6 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Nup35Q8R4R6 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Nup35Q8R4R6 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Nup35Q8R4R6 AC109214.1-201ENSMUST00000219520 1372 ntBASIC9.31□□□□□ -0.92
Nup35Q8R4R6 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Nup35Q8R4R6 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Nup35Q8R4R6 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Nup35Q8R4R6 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Nup35Q8R4R6 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Nup35Q8R4R6 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Nup35Q8R4R6 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Nup35Q8R4R6 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC9.31□□□□□ -0.92
Nup35Q8R4R6 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Nup35Q8R4R6 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Nup35Q8R4R6 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Nup35Q8R4R6 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Nup35Q8R4R6 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Nup35Q8R4R6 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Nup35Q8R4R6 Gm18210-201ENSMUST00000209001 1524 ntBASIC9.31□□□□□ -0.92
Nup35Q8R4R6 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Nup35Q8R4R6 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
Nup35Q8R4R6 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Nup35Q8R4R6 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC9.31□□□□□ -0.92
Nup35Q8R4R6 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC9.31□□□□□ -0.92
Nup35Q8R4R6 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Nup35Q8R4R6 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Nup35Q8R4R6 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Nup35Q8R4R6 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
Nup35Q8R4R6 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Nup35Q8R4R6 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Nup35Q8R4R6 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Nup35Q8R4R6 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Nup35Q8R4R6 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Nup35Q8R4R6 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Nup35Q8R4R6 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Nup35Q8R4R6 Col19a1-202ENSMUST00000115244 4266 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Nup35Q8R4R6 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Nup35Q8R4R6 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Nup35Q8R4R6 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Nup35Q8R4R6 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Nup35Q8R4R6 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Nup35Q8R4R6 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Nup35Q8R4R6 Gm37031-201ENSMUST00000195487 2530 ntBASIC9.3□□□□□ -0.92
Nup35Q8R4R6 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
Nup35Q8R4R6 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC9.3□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms