Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Chmp7Q8R1T1 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC14.64□□□□□ -0.07
Chmp7Q8R1T1 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Chmp7Q8R1T1 Gm9369-201ENSMUST00000196009 733 ntBASIC14.64□□□□□ -0.07
Chmp7Q8R1T1 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chmp7Q8R1T1 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC14.64□□□□□ -0.07
Chmp7Q8R1T1 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Chmp7Q8R1T1 Gm18706-201ENSMUST00000210053 1066 ntBASIC14.64□□□□□ -0.07
Chmp7Q8R1T1 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Chmp7Q8R1T1 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Chmp7Q8R1T1 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chmp7Q8R1T1 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Chmp7Q8R1T1 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
Chmp7Q8R1T1 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chmp7Q8R1T1 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Chmp7Q8R1T1 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chmp7Q8R1T1 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Chmp7Q8R1T1 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
Chmp7Q8R1T1 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chmp7Q8R1T1 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chmp7Q8R1T1 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chmp7Q8R1T1 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chmp7Q8R1T1 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC14.63□□□□□ -0.07
Chmp7Q8R1T1 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Chmp7Q8R1T1 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Chmp7Q8R1T1 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Chmp7Q8R1T1 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Chmp7Q8R1T1 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Chmp7Q8R1T1 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Chmp7Q8R1T1 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Chmp7Q8R1T1 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Chmp7Q8R1T1 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC14.63□□□□□ -0.07
Chmp7Q8R1T1 Gm9133-201ENSMUST00000118289 540 ntBASIC14.63□□□□□ -0.07
Chmp7Q8R1T1 Gm14993-201ENSMUST00000121180 164 ntBASIC14.63□□□□□ -0.07
Chmp7Q8R1T1 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC14.63□□□□□ -0.07
Chmp7Q8R1T1 Gm20392-201ENSMUST00000173047 701 ntBASIC14.63□□□□□ -0.07
Chmp7Q8R1T1 Gm18201-201ENSMUST00000174735 875 ntBASIC14.63□□□□□ -0.07
Chmp7Q8R1T1 Gm24809-201ENSMUST00000175318 271 ntBASIC14.63□□□□□ -0.07
Chmp7Q8R1T1 Gm30946-201ENSMUST00000198288 724 ntBASIC14.63□□□□□ -0.07
Chmp7Q8R1T1 Gm45500-201ENSMUST00000211676 803 ntBASIC14.63□□□□□ -0.07
Chmp7Q8R1T1 Gm2594-201ENSMUST00000214774 742 ntBASIC14.63□□□□□ -0.07
Chmp7Q8R1T1 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Chmp7Q8R1T1 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Chmp7Q8R1T1 Ntrk2-204ENSMUST00000224259 3049 ntBASIC14.63□□□□□ -0.07
Chmp7Q8R1T1 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Chmp7Q8R1T1 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Chmp7Q8R1T1 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Chmp7Q8R1T1 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Chmp7Q8R1T1 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Chmp7Q8R1T1 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Chmp7Q8R1T1 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
Chmp7Q8R1T1 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Chmp7Q8R1T1 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Chmp7Q8R1T1 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp7Q8R1T1 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp7Q8R1T1 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp7Q8R1T1 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Chmp7Q8R1T1 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp7Q8R1T1 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp7Q8R1T1 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp7Q8R1T1 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp7Q8R1T1 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Chmp7Q8R1T1 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp7Q8R1T1 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp7Q8R1T1 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp7Q8R1T1 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp7Q8R1T1 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp7Q8R1T1 Gm15003-201ENSMUST00000118884 446 ntBASIC14.62□□□□□ -0.07
Chmp7Q8R1T1 Gm14497-201ENSMUST00000119537 580 ntBASIC14.62□□□□□ -0.07
Chmp7Q8R1T1 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp7Q8R1T1 Gm3329-201ENSMUST00000159873 556 ntBASIC14.62□□□□□ -0.07
Chmp7Q8R1T1 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp7Q8R1T1 Gm5342-201ENSMUST00000181982 1003 ntBASIC14.62□□□□□ -0.07
Chmp7Q8R1T1 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp7Q8R1T1 Gm37365-201ENSMUST00000193109 409 ntBASIC14.62□□□□□ -0.07
Chmp7Q8R1T1 Gm37122-201ENSMUST00000195313 1567 ntBASIC14.62□□□□□ -0.07
Chmp7Q8R1T1 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC14.62□□□□□ -0.07
Chmp7Q8R1T1 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp7Q8R1T1 AC122891.1-201ENSMUST00000218671 268 ntBASIC14.62□□□□□ -0.07
Chmp7Q8R1T1 AC122035.1-201ENSMUST00000227576 1016 ntBASIC14.62□□□□□ -0.07
Chmp7Q8R1T1 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp7Q8R1T1 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp7Q8R1T1 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Chmp7Q8R1T1 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp7Q8R1T1 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp7Q8R1T1 Gm38194-201ENSMUST00000194529 2211 ntBASIC14.62□□□□□ -0.07
Chmp7Q8R1T1 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp7Q8R1T1 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp7Q8R1T1 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp7Q8R1T1 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp7Q8R1T1 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp7Q8R1T1 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC14.62□□□□□ -0.07
Chmp7Q8R1T1 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC14.62□□□□□ -0.07
Chmp7Q8R1T1 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp7Q8R1T1 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp7Q8R1T1 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chmp7Q8R1T1 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp7Q8R1T1 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp7Q8R1T1 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
Chmp7Q8R1T1 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms