Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ebf4Q8K4J2 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ebf4Q8K4J2 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC10.39□□□□□ -0.75
Ebf4Q8K4J2 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ebf4Q8K4J2 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ebf4Q8K4J2 Slc5a9-201ENSMUST00000102719 2460 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ebf4Q8K4J2 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ebf4Q8K4J2 Psat1-205ENSMUST00000162053 2291 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Ebf4Q8K4J2 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Ebf4Q8K4J2 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ebf4Q8K4J2 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ebf4Q8K4J2 Gm16177-201ENSMUST00000120728 718 ntBASIC10.39□□□□□ -0.75
Ebf4Q8K4J2 Gm1335-201ENSMUST00000121653 386 ntBASIC10.39□□□□□ -0.75
Ebf4Q8K4J2 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC10.39□□□□□ -0.75
Ebf4Q8K4J2 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Ebf4Q8K4J2 Gm27486-201ENSMUST00000184923 80 ntBASIC10.39□□□□□ -0.75
Ebf4Q8K4J2 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Ebf4Q8K4J2 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC10.39□□□□□ -0.75
Ebf4Q8K4J2 Gm34767-201ENSMUST00000191813 1062 ntBASIC10.39□□□□□ -0.75
Ebf4Q8K4J2 Gm37597-201ENSMUST00000191853 382 ntBASIC10.39□□□□□ -0.75
Ebf4Q8K4J2 Gm19287-201ENSMUST00000203190 358 ntBASIC10.39□□□□□ -0.75
Ebf4Q8K4J2 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Ebf4Q8K4J2 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Ebf4Q8K4J2 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC10.39□□□□□ -0.75
Ebf4Q8K4J2 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ebf4Q8K4J2 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ebf4Q8K4J2 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Ebf4Q8K4J2 Dzip1l-204ENSMUST00000112886 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ebf4Q8K4J2 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Ebf4Q8K4J2 Satb1-207ENSMUST00000140979 3748 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Ebf4Q8K4J2 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ebf4Q8K4J2 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
Ebf4Q8K4J2 Ppef2-202ENSMUST00000201130 2878 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ebf4Q8K4J2 Tram2-201ENSMUST00000037998 6492 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ebf4Q8K4J2 Bcl2-202ENSMUST00000189999 2841 ntBASIC10.39□□□□□ -0.75
Ebf4Q8K4J2 Ccdc167-203ENSMUST00000129091 2256 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Ebf4Q8K4J2 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Ebf4Q8K4J2 Anapc15-213ENSMUST00000178851 2797 ntTSL 2 BASIC10.38□□□□□ -0.75
Ebf4Q8K4J2 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ebf4Q8K4J2 Prox1-203ENSMUST00000177288 3144 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Ebf4Q8K4J2 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ebf4Q8K4J2 Tti2-204ENSMUST00000210129 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ebf4Q8K4J2 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC10.38□□□□□ -0.75
Ebf4Q8K4J2 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC10.38□□□□□ -0.75
Ebf4Q8K4J2 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Ebf4Q8K4J2 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ebf4Q8K4J2 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ebf4Q8K4J2 Znrf1-202ENSMUST00000166859 3650 ntTSL 5 BASIC10.38□□□□□ -0.75
Ebf4Q8K4J2 Gdf2-201ENSMUST00000100720 2988 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ebf4Q8K4J2 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ebf4Q8K4J2 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC10.38□□□□□ -0.75
Ebf4Q8K4J2 Mir1896-201ENSMUST00000122641 81 ntBASIC10.38□□□□□ -0.75
Ebf4Q8K4J2 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ebf4Q8K4J2 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Ebf4Q8K4J2 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Ebf4Q8K4J2 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC10.38□□□□□ -0.75
Ebf4Q8K4J2 Gm12367-202ENSMUST00000146909 2105 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Ebf4Q8K4J2 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC10.38□□□□□ -0.75
Ebf4Q8K4J2 Gm2639-201ENSMUST00000156881 1297 ntBASIC10.38□□□□□ -0.75
Ebf4Q8K4J2 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Ebf4Q8K4J2 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC10.38□□□□□ -0.75
Ebf4Q8K4J2 Pigq-218ENSMUST00000208043 2987 ntAPPRIS P3 TSL 5 BASIC10.38□□□□□ -0.75
Ebf4Q8K4J2 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC10.38□□□□□ -0.75
Ebf4Q8K4J2 Gm4935-201ENSMUST00000221316 1198 ntBASIC10.38□□□□□ -0.75
Ebf4Q8K4J2 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ebf4Q8K4J2 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ebf4Q8K4J2 Ticam1-201ENSMUST00000058136 2992 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ebf4Q8K4J2 Gm8399-201ENSMUST00000082300 1117 ntBASIC10.38□□□□□ -0.75
Ebf4Q8K4J2 Gm6091-201ENSMUST00000098307 165 ntBASIC10.38□□□□□ -0.75
Ebf4Q8K4J2 Git1-202ENSMUST00000100812 3476 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Ebf4Q8K4J2 Tcp10a-203ENSMUST00000129709 1778 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ebf4Q8K4J2 Gm8320-201ENSMUST00000177584 1762 ntBASIC10.38□□□□□ -0.75
Ebf4Q8K4J2 Gm8303-201ENSMUST00000178371 1762 ntBASIC10.38□□□□□ -0.75
Ebf4Q8K4J2 Gm8331-201ENSMUST00000178433 1762 ntBASIC10.38□□□□□ -0.75
Ebf4Q8K4J2 Ifi211-201ENSMUST00000009340 1785 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ebf4Q8K4J2 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Ebf4Q8K4J2 Spata33-207ENSMUST00000212760 4074 ntBASIC10.38□□□□□ -0.75
Ebf4Q8K4J2 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC10.38□□□□□ -0.75
Ebf4Q8K4J2 Olfr1495-203ENSMUST00000216980 2063 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Ebf4Q8K4J2 Catsper1-201ENSMUST00000043380 2061 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ebf4Q8K4J2 Tro-201ENSMUST00000087253 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ebf4Q8K4J2 Hmg20a-205ENSMUST00000215269 1700 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ebf4Q8K4J2 Gm11571-201ENSMUST00000136820 2396 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Ebf4Q8K4J2 Rab3c-202ENSMUST00000223922 2398 ntBASIC10.38□□□□□ -0.75
Ebf4Q8K4J2 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Ebf4Q8K4J2 Oprm1-230ENSMUST00000154906 2039 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Ebf4Q8K4J2 Nos1ap-203ENSMUST00000160466 1533 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Ebf4Q8K4J2 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Ebf4Q8K4J2 Zkscan6-201ENSMUST00000018491 2302 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ebf4Q8K4J2 Ccdc136-202ENSMUST00000115275 3279 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Ebf4Q8K4J2 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Ebf4Q8K4J2 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Ebf4Q8K4J2 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC10.38□□□□□ -0.75
Ebf4Q8K4J2 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC10.38□□□□□ -0.75
Ebf4Q8K4J2 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC10.37□□□□□ -0.75
Ebf4Q8K4J2 Lrrc49-204ENSMUST00000114034 2779 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ebf4Q8K4J2 Cnr2-202ENSMUST00000097843 3867 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ebf4Q8K4J2 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ebf4Q8K4J2 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC10.37□□□□□ -0.75
Ebf4Q8K4J2 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms