Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC10.8□□□□□ -0.68
Clrn1Q8K445 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC10.8□□□□□ -0.68
Clrn1Q8K445 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC10.8□□□□□ -0.68
Clrn1Q8K445 Gm43966-201ENSMUST00000203301 612 ntBASIC10.8□□□□□ -0.68
Clrn1Q8K445 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Clrn1Q8K445 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC10.8□□□□□ -0.68
Clrn1Q8K445 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Clrn1Q8K445 Gm10254-201ENSMUST00000052888 867 ntBASIC10.8□□□□□ -0.68
Clrn1Q8K445 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Clrn1Q8K445 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Clrn1Q8K445 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Clrn1Q8K445 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC10.8□□□□□ -0.68
Clrn1Q8K445 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Clrn1Q8K445 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Clrn1Q8K445 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Clrn1Q8K445 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Clrn1Q8K445 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Clrn1Q8K445 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Clrn1Q8K445 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Clrn1Q8K445 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Clrn1Q8K445 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Clrn1Q8K445 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Clrn1Q8K445 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Clrn1Q8K445 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Clrn1Q8K445 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Clrn1Q8K445 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Clrn1Q8K445 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Clrn1Q8K445 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Clrn1Q8K445 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Clrn1Q8K445 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Clrn1Q8K445 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Clrn1Q8K445 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Clrn1Q8K445 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Clrn1Q8K445 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Clrn1Q8K445 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Clrn1Q8K445 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Clrn1Q8K445 Gm37931-201ENSMUST00000194686 2866 ntBASIC10.79□□□□□ -0.68
Clrn1Q8K445 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Clrn1Q8K445 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Clrn1Q8K445 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Clrn1Q8K445 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Clrn1Q8K445 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Clrn1Q8K445 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Clrn1Q8K445 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC10.79□□□□□ -0.68
Clrn1Q8K445 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Clrn1Q8K445 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Clrn1Q8K445 Gm37122-201ENSMUST00000195313 1567 ntBASIC10.79□□□□□ -0.68
Clrn1Q8K445 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
Clrn1Q8K445 Gm44190-201ENSMUST00000205083 1401 ntBASIC10.79□□□□□ -0.68
Clrn1Q8K445 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Clrn1Q8K445 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Clrn1Q8K445 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Clrn1Q8K445 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Clrn1Q8K445 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC10.79□□□□□ -0.68
Clrn1Q8K445 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Clrn1Q8K445 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC10.79□□□□□ -0.68
Clrn1Q8K445 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC10.79□□□□□ -0.68
Clrn1Q8K445 Gm44008-201ENSMUST00000204345 412 ntBASIC10.79□□□□□ -0.68
Clrn1Q8K445 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC10.79□□□□□ -0.68
Clrn1Q8K445 Ginm1-202ENSMUST00000065124 300 ntBASIC10.79□□□□□ -0.68
Clrn1Q8K445 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Clrn1Q8K445 Wipf2-201ENSMUST00000037480 7011 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Clrn1Q8K445 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Clrn1Q8K445 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Clrn1Q8K445 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Clrn1Q8K445 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Clrn1Q8K445 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Clrn1Q8K445 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Clrn1Q8K445 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Clrn1Q8K445 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Clrn1Q8K445 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Clrn1Q8K445 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Clrn1Q8K445 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Clrn1Q8K445 AC154537.1-201ENSMUST00000226101 1304 ntBASIC10.79□□□□□ -0.68
Clrn1Q8K445 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC10.79□□□□□ -0.68
Clrn1Q8K445 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Clrn1Q8K445 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Clrn1Q8K445 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC10.79□□□□□ -0.68
Clrn1Q8K445 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Clrn1Q8K445 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC10.79□□□□□ -0.68
Clrn1Q8K445 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Clrn1Q8K445 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Clrn1Q8K445 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC10.78□□□□□ -0.68
Clrn1Q8K445 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Clrn1Q8K445 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Clrn1Q8K445 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Clrn1Q8K445 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC10.78□□□□□ -0.68
Clrn1Q8K445 Gm37969-201ENSMUST00000195777 3409 ntBASIC10.78□□□□□ -0.68
Clrn1Q8K445 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Clrn1Q8K445 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Clrn1Q8K445 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Clrn1Q8K445 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Clrn1Q8K445 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Clrn1Q8K445 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Clrn1Q8K445 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC10.78□□□□□ -0.68
Clrn1Q8K445 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Clrn1Q8K445 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Clrn1Q8K445 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Clrn1Q8K445 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Clrn1Q8K445 Gm12165-201ENSMUST00000117047 342 ntBASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms