Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Gm5732-201ENSMUST00000182596 1007 ntBASIC11.56□□□□□ -0.56
Clip4Q8CI96 Gm36940-201ENSMUST00000194281 2036 ntBASIC11.56□□□□□ -0.56
Clip4Q8CI96 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Clip4Q8CI96 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC11.56□□□□□ -0.56
Clip4Q8CI96 Gm9797-202ENSMUST00000218003 294 ntBASIC11.56□□□□□ -0.56
Clip4Q8CI96 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC11.56□□□□□ -0.56
Clip4Q8CI96 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Clip4Q8CI96 AC131330.1-201ENSMUST00000227814 1015 ntBASIC11.56□□□□□ -0.56
Clip4Q8CI96 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Clip4Q8CI96 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Clip4Q8CI96 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Clip4Q8CI96 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Clip4Q8CI96 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Clip4Q8CI96 Gm43931-201ENSMUST00000204817 2870 ntBASIC11.56□□□□□ -0.56
Clip4Q8CI96 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Clip4Q8CI96 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Clip4Q8CI96 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Clip4Q8CI96 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC11.56□□□□□ -0.56
Clip4Q8CI96 Gm29358-202ENSMUST00000187941 3227 ntBASIC11.56□□□□□ -0.56
Clip4Q8CI96 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Clip4Q8CI96 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Clip4Q8CI96 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Clip4Q8CI96 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Clip4Q8CI96 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Clip4Q8CI96 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clip4Q8CI96 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC11.55□□□□□ -0.56
Clip4Q8CI96 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Clip4Q8CI96 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC11.55□□□□□ -0.56
Clip4Q8CI96 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clip4Q8CI96 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Clip4Q8CI96 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC11.55□□□□□ -0.56
Clip4Q8CI96 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clip4Q8CI96 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clip4Q8CI96 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clip4Q8CI96 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
Clip4Q8CI96 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clip4Q8CI96 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC11.55□□□□□ -0.56
Clip4Q8CI96 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Clip4Q8CI96 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clip4Q8CI96 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC11.55□□□□□ -0.56
Clip4Q8CI96 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clip4Q8CI96 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC11.55□□□□□ -0.56
Clip4Q8CI96 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Clip4Q8CI96 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clip4Q8CI96 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Clip4Q8CI96 Gm8100-201ENSMUST00000182906 988 ntBASIC11.55□□□□□ -0.56
Clip4Q8CI96 Gm28686-201ENSMUST00000187404 609 ntBASIC11.55□□□□□ -0.56
Clip4Q8CI96 Gm43378-201ENSMUST00000199336 582 ntBASIC11.55□□□□□ -0.56
Clip4Q8CI96 Gm4482-201ENSMUST00000200876 742 ntBASIC11.55□□□□□ -0.56
Clip4Q8CI96 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Clip4Q8CI96 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC11.55□□□□□ -0.56
Clip4Q8CI96 Gm5369-201ENSMUST00000217499 588 ntBASIC11.55□□□□□ -0.56
Clip4Q8CI96 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Clip4Q8CI96 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clip4Q8CI96 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clip4Q8CI96 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clip4Q8CI96 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clip4Q8CI96 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Clip4Q8CI96 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
Clip4Q8CI96 Gm8155-201ENSMUST00000216363 1612 ntBASIC11.55□□□□□ -0.56
Clip4Q8CI96 Gm36957-201ENSMUST00000192982 2824 ntBASIC11.55□□□□□ -0.56
Clip4Q8CI96 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clip4Q8CI96 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Clip4Q8CI96 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clip4Q8CI96 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clip4Q8CI96 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clip4Q8CI96 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clip4Q8CI96 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Clip4Q8CI96 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clip4Q8CI96 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clip4Q8CI96 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC11.55□□□□□ -0.56
Clip4Q8CI96 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC11.55□□□□□ -0.56
Clip4Q8CI96 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Clip4Q8CI96 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clip4Q8CI96 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clip4Q8CI96 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clip4Q8CI96 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clip4Q8CI96 Gm6580-201ENSMUST00000117504 1357 ntBASIC11.54□□□□□ -0.56
Clip4Q8CI96 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Clip4Q8CI96 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Clip4Q8CI96 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Clip4Q8CI96 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Clip4Q8CI96 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Clip4Q8CI96 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Clip4Q8CI96 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Clip4Q8CI96 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Clip4Q8CI96 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Clip4Q8CI96 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Clip4Q8CI96 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Clip4Q8CI96 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Clip4Q8CI96 Gm8146-201ENSMUST00000192106 1847 ntBASIC11.54□□□□□ -0.56
Clip4Q8CI96 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Clip4Q8CI96 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Clip4Q8CI96 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Clip4Q8CI96 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Clip4Q8CI96 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Clip4Q8CI96 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC11.54□□□□□ -0.56
Clip4Q8CI96 Gm8566-201ENSMUST00000120174 465 ntBASIC11.54□□□□□ -0.56
Clip4Q8CI96 Gm12201-201ENSMUST00000120657 1234 ntBASIC11.54□□□□□ -0.56
Clip4Q8CI96 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms