Protein–RNA interactions for Protein: Q8CGP4

Hist1h2aa, Histone H2A, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h2aaQ8CGP4 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC10.8□□□□□ -0.68
Hist1h2aaQ8CGP4 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC10.8□□□□□ -0.68
Hist1h2aaQ8CGP4 AC113441.2-201ENSMUST00000221538 1468 ntBASIC10.8□□□□□ -0.68
Hist1h2aaQ8CGP4 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC10.8□□□□□ -0.68
Hist1h2aaQ8CGP4 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hist1h2aaQ8CGP4 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Hist1h2aaQ8CGP4 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Hist1h2aaQ8CGP4 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Hist1h2aaQ8CGP4 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hist1h2aaQ8CGP4 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Hist1h2aaQ8CGP4 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hist1h2aaQ8CGP4 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hist1h2aaQ8CGP4 Gm14150-201ENSMUST00000122404 1354 ntBASIC10.79□□□□□ -0.68
Hist1h2aaQ8CGP4 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Hist1h2aaQ8CGP4 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Hist1h2aaQ8CGP4 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hist1h2aaQ8CGP4 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hist1h2aaQ8CGP4 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Hist1h2aaQ8CGP4 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Hist1h2aaQ8CGP4 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
Hist1h2aaQ8CGP4 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
Hist1h2aaQ8CGP4 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Hist1h2aaQ8CGP4 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Hist1h2aaQ8CGP4 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hist1h2aaQ8CGP4 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hist1h2aaQ8CGP4 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hist1h2aaQ8CGP4 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC10.79□□□□□ -0.68
Hist1h2aaQ8CGP4 Gm15515-201ENSMUST00000117827 822 ntBASIC10.79□□□□□ -0.68
Hist1h2aaQ8CGP4 Gm7857-201ENSMUST00000117957 358 ntBASIC10.79□□□□□ -0.68
Hist1h2aaQ8CGP4 Gm12217-201ENSMUST00000118858 696 ntBASIC10.79□□□□□ -0.68
Hist1h2aaQ8CGP4 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC10.79□□□□□ -0.68
Hist1h2aaQ8CGP4 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC10.79□□□□□ -0.68
Hist1h2aaQ8CGP4 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC10.79□□□□□ -0.68
Hist1h2aaQ8CGP4 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Hist1h2aaQ8CGP4 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC10.79□□□□□ -0.68
Hist1h2aaQ8CGP4 Gm29499-201ENSMUST00000189151 486 ntBASIC10.79□□□□□ -0.68
Hist1h2aaQ8CGP4 Gm28329-201ENSMUST00000191208 689 ntBASIC10.79□□□□□ -0.68
Hist1h2aaQ8CGP4 Gm29171-201ENSMUST00000191397 486 ntBASIC10.79□□□□□ -0.68
Hist1h2aaQ8CGP4 Gm42682-201ENSMUST00000198349 1265 ntBASIC10.79□□□□□ -0.68
Hist1h2aaQ8CGP4 Gm6867-201ENSMUST00000219165 425 ntBASIC10.79□□□□□ -0.68
Hist1h2aaQ8CGP4 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hist1h2aaQ8CGP4 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hist1h2aaQ8CGP4 Tacr1-201ENSMUST00000032122 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hist1h2aaQ8CGP4 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hist1h2aaQ8CGP4 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Hist1h2aaQ8CGP4 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hist1h2aaQ8CGP4 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hist1h2aaQ8CGP4 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC10.79□□□□□ -0.68
Hist1h2aaQ8CGP4 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hist1h2aaQ8CGP4 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Hist1h2aaQ8CGP4 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hist1h2aaQ8CGP4 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hist1h2aaQ8CGP4 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Hist1h2aaQ8CGP4 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Hist1h2aaQ8CGP4 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hist1h2aaQ8CGP4 Gm6580-201ENSMUST00000117504 1357 ntBASIC10.78□□□□□ -0.68
Hist1h2aaQ8CGP4 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hist1h2aaQ8CGP4 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hist1h2aaQ8CGP4 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Hist1h2aaQ8CGP4 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Hist1h2aaQ8CGP4 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Hist1h2aaQ8CGP4 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Hist1h2aaQ8CGP4 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Hist1h2aaQ8CGP4 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hist1h2aaQ8CGP4 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hist1h2aaQ8CGP4 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Hist1h2aaQ8CGP4 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Hist1h2aaQ8CGP4 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC10.78□□□□□ -0.68
Hist1h2aaQ8CGP4 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Hist1h2aaQ8CGP4 Gm14071-201ENSMUST00000117817 509 ntBASIC10.78□□□□□ -0.68
Hist1h2aaQ8CGP4 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC10.78□□□□□ -0.68
Hist1h2aaQ8CGP4 Gm8199-201ENSMUST00000121323 823 ntBASIC10.78□□□□□ -0.68
Hist1h2aaQ8CGP4 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC10.78□□□□□ -0.68
Hist1h2aaQ8CGP4 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC10.78□□□□□ -0.68
Hist1h2aaQ8CGP4 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Hist1h2aaQ8CGP4 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
Hist1h2aaQ8CGP4 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hist1h2aaQ8CGP4 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC10.78□□□□□ -0.68
Hist1h2aaQ8CGP4 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Hist1h2aaQ8CGP4 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hist1h2aaQ8CGP4 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Hist1h2aaQ8CGP4 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hist1h2aaQ8CGP4 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hist1h2aaQ8CGP4 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC10.78□□□□□ -0.68
Hist1h2aaQ8CGP4 E130308A19Rik-202ENSMUST00000070150 10856 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hist1h2aaQ8CGP4 Svil-211ENSMUST00000143254 6594 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Hist1h2aaQ8CGP4 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Hist1h2aaQ8CGP4 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hist1h2aaQ8CGP4 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hist1h2aaQ8CGP4 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC10.78□□□□□ -0.68
Hist1h2aaQ8CGP4 Adgrl3-215ENSMUST00000120673 5178 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Hist1h2aaQ8CGP4 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC10.78□□□□□ -0.68
Hist1h2aaQ8CGP4 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hist1h2aaQ8CGP4 Gm44755-201ENSMUST00000207830 2102 ntBASIC10.78□□□□□ -0.68
Hist1h2aaQ8CGP4 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Hist1h2aaQ8CGP4 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
Hist1h2aaQ8CGP4 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Hist1h2aaQ8CGP4 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Hist1h2aaQ8CGP4 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Hist1h2aaQ8CGP4 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms