Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc87Q8CDL9 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC12.17□□□□□ -0.46
Ccdc87Q8CDL9 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC12.17□□□□□ -0.46
Ccdc87Q8CDL9 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC12.17□□□□□ -0.46
Ccdc87Q8CDL9 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC12.17□□□□□ -0.46
Ccdc87Q8CDL9 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC12.17□□□□□ -0.46
Ccdc87Q8CDL9 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc87Q8CDL9 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC12.17□□□□□ -0.46
Ccdc87Q8CDL9 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc87Q8CDL9 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Ccdc87Q8CDL9 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc87Q8CDL9 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Ccdc87Q8CDL9 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Ccdc87Q8CDL9 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc87Q8CDL9 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
Ccdc87Q8CDL9 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC12.17□□□□□ -0.46
Ccdc87Q8CDL9 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC12.17□□□□□ -0.46
Ccdc87Q8CDL9 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc87Q8CDL9 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc87Q8CDL9 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc87Q8CDL9 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc87Q8CDL9 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Ccdc87Q8CDL9 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc87Q8CDL9 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc87Q8CDL9 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc87Q8CDL9 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc87Q8CDL9 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc87Q8CDL9 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc87Q8CDL9 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Ccdc87Q8CDL9 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc87Q8CDL9 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc87Q8CDL9 Gm15004-201ENSMUST00000119192 630 ntBASIC12.16□□□□□ -0.46
Ccdc87Q8CDL9 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc87Q8CDL9 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC12.16□□□□□ -0.46
Ccdc87Q8CDL9 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC12.16□□□□□ -0.46
Ccdc87Q8CDL9 Gm27341-201ENSMUST00000183570 106 ntBASIC12.16□□□□□ -0.46
Ccdc87Q8CDL9 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC12.16□□□□□ -0.46
Ccdc87Q8CDL9 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC12.16□□□□□ -0.46
Ccdc87Q8CDL9 Ighv5-7-201ENSMUST00000192302 244 ntBASIC12.16□□□□□ -0.46
Ccdc87Q8CDL9 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Ccdc87Q8CDL9 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC12.16□□□□□ -0.46
Ccdc87Q8CDL9 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc87Q8CDL9 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc87Q8CDL9 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc87Q8CDL9 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc87Q8CDL9 AC171277.1-201ENSMUST00000216902 1441 ntBASIC12.16□□□□□ -0.46
Ccdc87Q8CDL9 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC12.16□□□□□ -0.46
Ccdc87Q8CDL9 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC12.16□□□□□ -0.46
Ccdc87Q8CDL9 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc87Q8CDL9 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc87Q8CDL9 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc87Q8CDL9 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc87Q8CDL9 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc87Q8CDL9 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc87Q8CDL9 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc87Q8CDL9 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc87Q8CDL9 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc87Q8CDL9 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc87Q8CDL9 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc87Q8CDL9 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc87Q8CDL9 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc87Q8CDL9 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Ccdc87Q8CDL9 Gm13347-201ENSMUST00000120298 1353 ntBASIC12.16□□□□□ -0.46
Ccdc87Q8CDL9 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc87Q8CDL9 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc87Q8CDL9 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC12.16□□□□□ -0.46
Ccdc87Q8CDL9 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc87Q8CDL9 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC12.16□□□□□ -0.46
Ccdc87Q8CDL9 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc87Q8CDL9 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Ccdc87Q8CDL9 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
Ccdc87Q8CDL9 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc87Q8CDL9 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc87Q8CDL9 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC12.15□□□□□ -0.46
Ccdc87Q8CDL9 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Ccdc87Q8CDL9 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc87Q8CDL9 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC12.15□□□□□ -0.46
Ccdc87Q8CDL9 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc87Q8CDL9 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc87Q8CDL9 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc87Q8CDL9 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Ccdc87Q8CDL9 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc87Q8CDL9 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc87Q8CDL9 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc87Q8CDL9 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc87Q8CDL9 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Ccdc87Q8CDL9 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc87Q8CDL9 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc87Q8CDL9 Gm14028-201ENSMUST00000117434 479 ntBASIC12.15□□□□□ -0.46
Ccdc87Q8CDL9 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc87Q8CDL9 Gm14208-201ENSMUST00000119645 678 ntBASIC12.15□□□□□ -0.46
Ccdc87Q8CDL9 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Ccdc87Q8CDL9 Gm27627-201ENSMUST00000183644 150 ntBASIC12.15□□□□□ -0.46
Ccdc87Q8CDL9 Gm29615-201ENSMUST00000185371 697 ntBASIC12.15□□□□□ -0.46
Ccdc87Q8CDL9 Gm28224-201ENSMUST00000186078 697 ntBASIC12.15□□□□□ -0.46
Ccdc87Q8CDL9 Gm29001-201ENSMUST00000186177 697 ntBASIC12.15□□□□□ -0.46
Ccdc87Q8CDL9 Gm28292-201ENSMUST00000186593 697 ntBASIC12.15□□□□□ -0.46
Ccdc87Q8CDL9 Gm28101-201ENSMUST00000187608 697 ntBASIC12.15□□□□□ -0.46
Ccdc87Q8CDL9 Gm29076-201ENSMUST00000187689 697 ntBASIC12.15□□□□□ -0.46
Ccdc87Q8CDL9 Gm28302-201ENSMUST00000187931 697 ntBASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 318 ms