Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pabpn1Q8CCS6 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pabpn1Q8CCS6 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC17.43■□□□□ 0.38
Pabpn1Q8CCS6 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pabpn1Q8CCS6 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pabpn1Q8CCS6 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pabpn1Q8CCS6 Arpp19-207ENSMUST00000169188 216 ntTSL 5 BASIC17.43■□□□□ 0.38
Pabpn1Q8CCS6 Gm20616-201ENSMUST00000177262 716 ntTSL 3 BASIC17.43■□□□□ 0.38
Pabpn1Q8CCS6 Gm21963-201ENSMUST00000179519 330 ntBASIC17.43■□□□□ 0.38
Pabpn1Q8CCS6 Vps25-201ENSMUST00000007533 615 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pabpn1Q8CCS6 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pabpn1Q8CCS6 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pabpn1Q8CCS6 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pabpn1Q8CCS6 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pabpn1Q8CCS6 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pabpn1Q8CCS6 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pabpn1Q8CCS6 Gpx6-201ENSMUST00000004453 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pabpn1Q8CCS6 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pabpn1Q8CCS6 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Pabpn1Q8CCS6 AC159195.1-201ENSMUST00000225867 2086 ntBASIC17.43■□□□□ 0.38
Pabpn1Q8CCS6 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pabpn1Q8CCS6 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pabpn1Q8CCS6 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pabpn1Q8CCS6 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pabpn1Q8CCS6 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pabpn1Q8CCS6 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pabpn1Q8CCS6 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pabpn1Q8CCS6 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pabpn1Q8CCS6 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Pabpn1Q8CCS6 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pabpn1Q8CCS6 A930003A15Rik-201ENSMUST00000100083 746 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pabpn1Q8CCS6 Mir675-201ENSMUST00000102320 84 ntBASIC17.42■□□□□ 0.38
Pabpn1Q8CCS6 Ighv1-22-201ENSMUST00000103507 351 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Pabpn1Q8CCS6 Odam-201ENSMUST00000113274 872 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pabpn1Q8CCS6 Oosp2-201ENSMUST00000121793 677 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pabpn1Q8CCS6 Wdr17-204ENSMUST00000129132 1043 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pabpn1Q8CCS6 Gm16252-201ENSMUST00000144420 857 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pabpn1Q8CCS6 Prdx5-204ENSMUST00000173091 501 ntTSL 5 BASIC17.42■□□□□ 0.38
Pabpn1Q8CCS6 Gzmf-201ENSMUST00000022757 919 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pabpn1Q8CCS6 AC133499.1-201ENSMUST00000227778 1097 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Pabpn1Q8CCS6 Eif3k-201ENSMUST00000066070 774 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pabpn1Q8CCS6 Pla2g2a-201ENSMUST00000077582 784 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Pabpn1Q8CCS6 Phactr1-214ENSMUST00000149235 2076 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Pabpn1Q8CCS6 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pabpn1Q8CCS6 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pabpn1Q8CCS6 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC17.42■□□□□ 0.38
Pabpn1Q8CCS6 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pabpn1Q8CCS6 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pabpn1Q8CCS6 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pabpn1Q8CCS6 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pabpn1Q8CCS6 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
Pabpn1Q8CCS6 Gm45546-201ENSMUST00000211053 2394 ntBASIC17.42■□□□□ 0.38
Pabpn1Q8CCS6 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pabpn1Q8CCS6 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pabpn1Q8CCS6 Pfn4-202ENSMUST00000178879 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pabpn1Q8CCS6 Gm44758-201ENSMUST00000206096 2068 ntBASIC17.41■□□□□ 0.38
Pabpn1Q8CCS6 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pabpn1Q8CCS6 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pabpn1Q8CCS6 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC17.41■□□□□ 0.38
Pabpn1Q8CCS6 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pabpn1Q8CCS6 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC17.41■□□□□ 0.38
Pabpn1Q8CCS6 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pabpn1Q8CCS6 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC17.41■□□□□ 0.38
Pabpn1Q8CCS6 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC17.41■□□□□ 0.38
Pabpn1Q8CCS6 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
Pabpn1Q8CCS6 Olfr62-201ENSMUST00000102666 949 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Pabpn1Q8CCS6 Gm5501-201ENSMUST00000165917 832 ntBASIC17.41■□□□□ 0.38
Pabpn1Q8CCS6 Gm26931-201ENSMUST00000182273 609 ntBASIC17.41■□□□□ 0.38
Pabpn1Q8CCS6 Gm29487-201ENSMUST00000190146 256 ntBASIC17.41■□□□□ 0.38
Pabpn1Q8CCS6 Gm34248-201ENSMUST00000200027 474 ntBASIC17.41■□□□□ 0.38
Pabpn1Q8CCS6 Gm42588-201ENSMUST00000200538 1297 ntBASIC17.41■□□□□ 0.38
Pabpn1Q8CCS6 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Pabpn1Q8CCS6 Mettl8-201ENSMUST00000090849 1842 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pabpn1Q8CCS6 Uros-204ENSMUST00000106146 1483 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Pabpn1Q8CCS6 H2-DMb2-202ENSMUST00000171231 1483 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pabpn1Q8CCS6 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pabpn1Q8CCS6 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pabpn1Q8CCS6 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pabpn1Q8CCS6 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pabpn1Q8CCS6 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pabpn1Q8CCS6 Gm11685-201ENSMUST00000141559 1332 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pabpn1Q8CCS6 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC17.41■□□□□ 0.38
Pabpn1Q8CCS6 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Pabpn1Q8CCS6 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Pabpn1Q8CCS6 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pabpn1Q8CCS6 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Pabpn1Q8CCS6 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC17.41■□□□□ 0.38
Pabpn1Q8CCS6 Apool-201ENSMUST00000026599 1359 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pabpn1Q8CCS6 Serpina1b-201ENSMUST00000095450 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pabpn1Q8CCS6 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Pabpn1Q8CCS6 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pabpn1Q8CCS6 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pabpn1Q8CCS6 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Pabpn1Q8CCS6 Vps45-201ENSMUST00000015891 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pabpn1Q8CCS6 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pabpn1Q8CCS6 5330411J11Rik-201ENSMUST00000137162 1635 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pabpn1Q8CCS6 Snx29-201ENSMUST00000096273 1622 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pabpn1Q8CCS6 Fam216b-202ENSMUST00000118785 1447 ntTSL 5 BASIC17.4■□□□□ 0.38
Pabpn1Q8CCS6 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pabpn1Q8CCS6 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms