Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim9Q8C7M3 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim9Q8C7M3 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim9Q8C7M3 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trim9Q8C7M3 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim9Q8C7M3 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC12.61□□□□□ -0.39
Trim9Q8C7M3 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trim9Q8C7M3 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim9Q8C7M3 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim9Q8C7M3 Gm4294-201ENSMUST00000105169 614 ntBASIC12.61□□□□□ -0.39
Trim9Q8C7M3 Gm12165-201ENSMUST00000117047 342 ntBASIC12.61□□□□□ -0.39
Trim9Q8C7M3 Gm11244-201ENSMUST00000121243 237 ntBASIC12.61□□□□□ -0.39
Trim9Q8C7M3 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Trim9Q8C7M3 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC12.61□□□□□ -0.39
Trim9Q8C7M3 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim9Q8C7M3 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim9Q8C7M3 Gm19353-201ENSMUST00000184561 445 ntBASIC12.61□□□□□ -0.39
Trim9Q8C7M3 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC12.61□□□□□ -0.39
Trim9Q8C7M3 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC12.61□□□□□ -0.39
Trim9Q8C7M3 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC12.61□□□□□ -0.39
Trim9Q8C7M3 Gm9555-201ENSMUST00000200908 583 ntBASIC12.61□□□□□ -0.39
Trim9Q8C7M3 Gm44270-201ENSMUST00000203084 1234 ntBASIC12.61□□□□□ -0.39
Trim9Q8C7M3 Gm8574-201ENSMUST00000203207 924 ntBASIC12.61□□□□□ -0.39
Trim9Q8C7M3 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Trim9Q8C7M3 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim9Q8C7M3 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim9Q8C7M3 Gm6781-201ENSMUST00000038304 1242 ntBASIC12.61□□□□□ -0.39
Trim9Q8C7M3 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Trim9Q8C7M3 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trim9Q8C7M3 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim9Q8C7M3 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim9Q8C7M3 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim9Q8C7M3 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim9Q8C7M3 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trim9Q8C7M3 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim9Q8C7M3 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC12.61□□□□□ -0.39
Trim9Q8C7M3 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
Trim9Q8C7M3 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim9Q8C7M3 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trim9Q8C7M3 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim9Q8C7M3 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim9Q8C7M3 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim9Q8C7M3 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim9Q8C7M3 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim9Q8C7M3 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim9Q8C7M3 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim9Q8C7M3 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trim9Q8C7M3 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim9Q8C7M3 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim9Q8C7M3 Gm18198-201ENSMUST00000204986 1551 ntBASIC12.6□□□□□ -0.39
Trim9Q8C7M3 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim9Q8C7M3 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim9Q8C7M3 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trim9Q8C7M3 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim9Q8C7M3 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim9Q8C7M3 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim9Q8C7M3 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trim9Q8C7M3 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim9Q8C7M3 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim9Q8C7M3 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim9Q8C7M3 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim9Q8C7M3 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim9Q8C7M3 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC12.6□□□□□ -0.39
Trim9Q8C7M3 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim9Q8C7M3 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim9Q8C7M3 Gm14740-201ENSMUST00000118538 1150 ntBASIC12.6□□□□□ -0.39
Trim9Q8C7M3 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC12.6□□□□□ -0.39
Trim9Q8C7M3 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim9Q8C7M3 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim9Q8C7M3 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC12.6□□□□□ -0.39
Trim9Q8C7M3 CT573047.1-201ENSMUST00000223652 851 ntBASIC12.6□□□□□ -0.39
Trim9Q8C7M3 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim9Q8C7M3 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Trim9Q8C7M3 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim9Q8C7M3 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim9Q8C7M3 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
Trim9Q8C7M3 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim9Q8C7M3 Gm6831-202ENSMUST00000213025 1673 ntBASIC12.6□□□□□ -0.39
Trim9Q8C7M3 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Trim9Q8C7M3 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim9Q8C7M3 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim9Q8C7M3 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim9Q8C7M3 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim9Q8C7M3 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Trim9Q8C7M3 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim9Q8C7M3 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC12.59□□□□□ -0.39
Trim9Q8C7M3 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim9Q8C7M3 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim9Q8C7M3 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Trim9Q8C7M3 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim9Q8C7M3 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Trim9Q8C7M3 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Trim9Q8C7M3 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Trim9Q8C7M3 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim9Q8C7M3 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Trim9Q8C7M3 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim9Q8C7M3 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim9Q8C7M3 Gm15352-201ENSMUST00000118696 270 ntBASIC12.59□□□□□ -0.39
Trim9Q8C7M3 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC12.59□□□□□ -0.39
Trim9Q8C7M3 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms