Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Vps9d1Q8C190 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Vps9d1Q8C190 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC10.75□□□□□ -0.69
Vps9d1Q8C190 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Vps9d1Q8C190 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Vps9d1Q8C190 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Vps9d1Q8C190 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Vps9d1Q8C190 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Vps9d1Q8C190 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Vps9d1Q8C190 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Vps9d1Q8C190 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Vps9d1Q8C190 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
Vps9d1Q8C190 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Vps9d1Q8C190 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Vps9d1Q8C190 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC10.74□□□□□ -0.69
Vps9d1Q8C190 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC10.74□□□□□ -0.69
Vps9d1Q8C190 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Vps9d1Q8C190 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Vps9d1Q8C190 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC10.74□□□□□ -0.69
Vps9d1Q8C190 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Vps9d1Q8C190 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Vps9d1Q8C190 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Vps9d1Q8C190 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Vps9d1Q8C190 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC10.74□□□□□ -0.69
Vps9d1Q8C190 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Vps9d1Q8C190 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Vps9d1Q8C190 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Vps9d1Q8C190 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Vps9d1Q8C190 Gm13296-201ENSMUST00000117854 997 ntBASIC10.74□□□□□ -0.69
Vps9d1Q8C190 Gm6963-201ENSMUST00000147879 379 ntBASIC10.74□□□□□ -0.69
Vps9d1Q8C190 Slc25a12-206ENSMUST00000151937 6351 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Vps9d1Q8C190 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC10.74□□□□□ -0.69
Vps9d1Q8C190 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Vps9d1Q8C190 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC10.74□□□□□ -0.69
Vps9d1Q8C190 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC10.74□□□□□ -0.69
Vps9d1Q8C190 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Vps9d1Q8C190 Mir5132-201ENSMUST00000175166 71 ntBASIC10.74□□□□□ -0.69
Vps9d1Q8C190 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Vps9d1Q8C190 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Vps9d1Q8C190 Gm45691-201ENSMUST00000206905 1120 ntBASIC10.74□□□□□ -0.69
Vps9d1Q8C190 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC10.74□□□□□ -0.69
Vps9d1Q8C190 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC10.74□□□□□ -0.69
Vps9d1Q8C190 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC10.74□□□□□ -0.69
Vps9d1Q8C190 Gzmn-202ENSMUST00000225535 989 ntBASIC10.74□□□□□ -0.69
Vps9d1Q8C190 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Vps9d1Q8C190 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Vps9d1Q8C190 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Vps9d1Q8C190 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Vps9d1Q8C190 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Vps9d1Q8C190 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Vps9d1Q8C190 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Vps9d1Q8C190 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Vps9d1Q8C190 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Vps9d1Q8C190 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Vps9d1Q8C190 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Vps9d1Q8C190 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Vps9d1Q8C190 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Vps9d1Q8C190 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Vps9d1Q8C190 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Vps9d1Q8C190 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Vps9d1Q8C190 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC10.73□□□□□ -0.69
Vps9d1Q8C190 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Vps9d1Q8C190 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Vps9d1Q8C190 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC10.73□□□□□ -0.69
Vps9d1Q8C190 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Vps9d1Q8C190 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Vps9d1Q8C190 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Vps9d1Q8C190 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Vps9d1Q8C190 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Vps9d1Q8C190 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Vps9d1Q8C190 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Vps9d1Q8C190 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Vps9d1Q8C190 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
Vps9d1Q8C190 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Vps9d1Q8C190 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC10.73□□□□□ -0.69
Vps9d1Q8C190 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Vps9d1Q8C190 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC10.73□□□□□ -0.69
Vps9d1Q8C190 Gm11511-201ENSMUST00000118146 540 ntBASIC10.73□□□□□ -0.69
Vps9d1Q8C190 Gm14130-201ENSMUST00000118417 987 ntBASIC10.73□□□□□ -0.69
Vps9d1Q8C190 Gm15004-201ENSMUST00000119192 630 ntBASIC10.73□□□□□ -0.69
Vps9d1Q8C190 Gm24990-201ENSMUST00000157406 323 ntBASIC10.73□□□□□ -0.69
Vps9d1Q8C190 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Vps9d1Q8C190 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC10.73□□□□□ -0.69
Vps9d1Q8C190 Gm16505-201ENSMUST00000179981 232 ntBASIC10.73□□□□□ -0.69
Vps9d1Q8C190 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC10.73□□□□□ -0.69
Vps9d1Q8C190 Gm2260-201ENSMUST00000184965 657 ntBASIC10.73□□□□□ -0.69
Vps9d1Q8C190 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Vps9d1Q8C190 Gm8885-201ENSMUST00000189382 598 ntBASIC10.73□□□□□ -0.69
Vps9d1Q8C190 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC10.73□□□□□ -0.69
Vps9d1Q8C190 Gm43068-201ENSMUST00000201095 1273 ntBASIC10.73□□□□□ -0.69
Vps9d1Q8C190 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Vps9d1Q8C190 Rps4l-202ENSMUST00000204242 789 ntBASIC10.73□□□□□ -0.69
Vps9d1Q8C190 AC155637.1-201ENSMUST00000218560 636 ntBASIC10.73□□□□□ -0.69
Vps9d1Q8C190 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC10.73□□□□□ -0.69
Vps9d1Q8C190 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Vps9d1Q8C190 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Vps9d1Q8C190 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Vps9d1Q8C190 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Vps9d1Q8C190 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC10.73□□□□□ -0.69
Vps9d1Q8C190 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 71.3 ms