Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Sh3rf2Q8BZT2 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sh3rf2Q8BZT2 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Sh3rf2Q8BZT2 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC11.62□□□□□ -0.55
Sh3rf2Q8BZT2 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sh3rf2Q8BZT2 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sh3rf2Q8BZT2 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sh3rf2Q8BZT2 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sh3rf2Q8BZT2 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Sh3rf2Q8BZT2 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sh3rf2Q8BZT2 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sh3rf2Q8BZT2 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC11.62□□□□□ -0.55
Sh3rf2Q8BZT2 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sh3rf2Q8BZT2 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sh3rf2Q8BZT2 Gm3836-201ENSMUST00000211377 1613 ntBASIC11.62□□□□□ -0.55
Sh3rf2Q8BZT2 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sh3rf2Q8BZT2 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Sh3rf2Q8BZT2 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC11.62□□□□□ -0.55
Sh3rf2Q8BZT2 Gm10169-201ENSMUST00000121822 348 ntBASIC11.62□□□□□ -0.55
Sh3rf2Q8BZT2 Gm12628-201ENSMUST00000122193 382 ntBASIC11.62□□□□□ -0.55
Sh3rf2Q8BZT2 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Sh3rf2Q8BZT2 Gm17709-201ENSMUST00000174536 1096 ntBASIC11.62□□□□□ -0.55
Sh3rf2Q8BZT2 Gm21778-201ENSMUST00000178779 471 ntBASIC11.62□□□□□ -0.55
Sh3rf2Q8BZT2 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC11.62□□□□□ -0.55
Sh3rf2Q8BZT2 Gm19166-201ENSMUST00000196041 1063 ntBASIC11.62□□□□□ -0.55
Sh3rf2Q8BZT2 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC11.62□□□□□ -0.55
Sh3rf2Q8BZT2 Gm45856-201ENSMUST00000212752 416 ntBASIC11.62□□□□□ -0.55
Sh3rf2Q8BZT2 Gm6653-201ENSMUST00000218063 1288 ntBASIC11.62□□□□□ -0.55
Sh3rf2Q8BZT2 CT009527.1-201ENSMUST00000224205 339 ntBASIC11.62□□□□□ -0.55
Sh3rf2Q8BZT2 AC164618.2-201ENSMUST00000224770 573 ntBASIC11.62□□□□□ -0.55
Sh3rf2Q8BZT2 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sh3rf2Q8BZT2 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sh3rf2Q8BZT2 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Sh3rf2Q8BZT2 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sh3rf2Q8BZT2 Gm43075-201ENSMUST00000198613 3905 ntBASIC11.62□□□□□ -0.55
Sh3rf2Q8BZT2 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Sh3rf2Q8BZT2 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Sh3rf2Q8BZT2 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sh3rf2Q8BZT2 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sh3rf2Q8BZT2 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Sh3rf2Q8BZT2 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC11.62□□□□□ -0.55
Sh3rf2Q8BZT2 AC165351.1-201ENSMUST00000219078 2020 ntBASIC11.62□□□□□ -0.55
Sh3rf2Q8BZT2 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sh3rf2Q8BZT2 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sh3rf2Q8BZT2 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC11.61□□□□□ -0.55
Sh3rf2Q8BZT2 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sh3rf2Q8BZT2 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sh3rf2Q8BZT2 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC11.61□□□□□ -0.55
Sh3rf2Q8BZT2 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Sh3rf2Q8BZT2 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC11.61□□□□□ -0.55
Sh3rf2Q8BZT2 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sh3rf2Q8BZT2 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Sh3rf2Q8BZT2 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Sh3rf2Q8BZT2 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sh3rf2Q8BZT2 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC11.61□□□□□ -0.55
Sh3rf2Q8BZT2 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Sh3rf2Q8BZT2 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sh3rf2Q8BZT2 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sh3rf2Q8BZT2 Gm14807-201ENSMUST00000116640 983 ntBASIC11.61□□□□□ -0.55
Sh3rf2Q8BZT2 Gm12274-201ENSMUST00000120062 385 ntBASIC11.61□□□□□ -0.55
Sh3rf2Q8BZT2 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC11.61□□□□□ -0.55
Sh3rf2Q8BZT2 Rn7s6-201ENSMUST00000175005 291 ntBASIC11.61□□□□□ -0.55
Sh3rf2Q8BZT2 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC11.61□□□□□ -0.55
Sh3rf2Q8BZT2 Gm3726-201ENSMUST00000203110 785 ntBASIC11.61□□□□□ -0.55
Sh3rf2Q8BZT2 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Sh3rf2Q8BZT2 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC11.61□□□□□ -0.55
Sh3rf2Q8BZT2 AC129308.3-201ENSMUST00000225652 524 ntBASIC11.61□□□□□ -0.55
Sh3rf2Q8BZT2 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sh3rf2Q8BZT2 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sh3rf2Q8BZT2 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Sh3rf2Q8BZT2 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sh3rf2Q8BZT2 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Sh3rf2Q8BZT2 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Sh3rf2Q8BZT2 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sh3rf2Q8BZT2 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Sh3rf2Q8BZT2 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sh3rf2Q8BZT2 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC11.61□□□□□ -0.55
Sh3rf2Q8BZT2 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Sh3rf2Q8BZT2 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sh3rf2Q8BZT2 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Sh3rf2Q8BZT2 AC130823.1-201ENSMUST00000228929 1549 ntBASIC11.6□□□□□ -0.55
Sh3rf2Q8BZT2 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC11.6□□□□□ -0.55
Sh3rf2Q8BZT2 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Sh3rf2Q8BZT2 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sh3rf2Q8BZT2 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.6□□□□□ -0.55
Sh3rf2Q8BZT2 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.6□□□□□ -0.55
Sh3rf2Q8BZT2 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sh3rf2Q8BZT2 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sh3rf2Q8BZT2 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sh3rf2Q8BZT2 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sh3rf2Q8BZT2 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Sh3rf2Q8BZT2 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Sh3rf2Q8BZT2 Gm25148-201ENSMUST00000104611 123 ntBASIC11.6□□□□□ -0.55
Sh3rf2Q8BZT2 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC11.6□□□□□ -0.55
Sh3rf2Q8BZT2 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Sh3rf2Q8BZT2 Gm12194-201ENSMUST00000117756 1012 ntBASIC11.6□□□□□ -0.55
Sh3rf2Q8BZT2 Gm15528-201ENSMUST00000117821 864 ntBASIC11.6□□□□□ -0.55
Sh3rf2Q8BZT2 Gm14270-201ENSMUST00000118388 846 ntBASIC11.6□□□□□ -0.55
Sh3rf2Q8BZT2 Gm11422-201ENSMUST00000118925 1103 ntBASIC11.6□□□□□ -0.55
Sh3rf2Q8BZT2 Gm14219-201ENSMUST00000120414 288 ntBASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms