Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Gm45206-201ENSMUST00000206885 2285 ntBASIC9.42□□□□□ -0.9
Smco3Q8BQM7 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Smco3Q8BQM7 Bdh1-203ENSMUST00000115227 3122 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Smco3Q8BQM7 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Smco3Q8BQM7 Gm5620-201ENSMUST00000077991 1348 ntBASIC9.42□□□□□ -0.9
Smco3Q8BQM7 Gm11591-201ENSMUST00000120063 702 ntBASIC9.42□□□□□ -0.9
Smco3Q8BQM7 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Smco3Q8BQM7 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC9.42□□□□□ -0.9
Smco3Q8BQM7 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Smco3Q8BQM7 Gm7809-201ENSMUST00000153199 742 ntBASIC9.42□□□□□ -0.9
Smco3Q8BQM7 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Smco3Q8BQM7 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC9.42□□□□□ -0.9
Smco3Q8BQM7 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Smco3Q8BQM7 Gm3890-201ENSMUST00000182416 207 ntBASIC9.42□□□□□ -0.9
Smco3Q8BQM7 Gm6114-201ENSMUST00000182472 968 ntBASIC9.42□□□□□ -0.9
Smco3Q8BQM7 Gm28882-201ENSMUST00000185504 314 ntBASIC9.42□□□□□ -0.9
Smco3Q8BQM7 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC9.42□□□□□ -0.9
Smco3Q8BQM7 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Smco3Q8BQM7 Gm38241-201ENSMUST00000192641 898 ntBASIC9.42□□□□□ -0.9
Smco3Q8BQM7 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC9.42□□□□□ -0.9
Smco3Q8BQM7 Ighv5-13-201ENSMUST00000193550 290 ntBASIC9.42□□□□□ -0.9
Smco3Q8BQM7 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC9.42□□□□□ -0.9
Smco3Q8BQM7 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC9.42□□□□□ -0.9
Smco3Q8BQM7 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC9.42□□□□□ -0.9
Smco3Q8BQM7 Gm4935-201ENSMUST00000221316 1198 ntBASIC9.42□□□□□ -0.9
Smco3Q8BQM7 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC9.42□□□□□ -0.9
Smco3Q8BQM7 CT025535.1-201ENSMUST00000227172 491 ntBASIC9.42□□□□□ -0.9
Smco3Q8BQM7 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC9.42□□□□□ -0.9
Smco3Q8BQM7 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Smco3Q8BQM7 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC9.42□□□□□ -0.9
Smco3Q8BQM7 Camk2b-210ENSMUST00000109815 3780 ntAPPRIS P2 TSL 5 BASIC9.42□□□□□ -0.9
Smco3Q8BQM7 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Smco3Q8BQM7 Epn2-203ENSMUST00000108712 4458 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Smco3Q8BQM7 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Smco3Q8BQM7 Kif13b-203ENSMUST00000224503 8865 ntAPPRIS ALT2 BASIC9.42□□□□□ -0.9
Smco3Q8BQM7 Sptan1-205ENSMUST00000113719 8018 ntTSL 5 BASIC9.42□□□□□ -0.9
Smco3Q8BQM7 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Smco3Q8BQM7 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Smco3Q8BQM7 Bicd1-203ENSMUST00000111513 4049 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Smco3Q8BQM7 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Smco3Q8BQM7 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Smco3Q8BQM7 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Smco3Q8BQM7 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Smco3Q8BQM7 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Smco3Q8BQM7 Pcdh18-202ENSMUST00000191794 5146 ntTSL 5 BASIC9.42□□□□□ -0.9
Smco3Q8BQM7 Wdr60-201ENSMUST00000039349 3721 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Smco3Q8BQM7 Nav1-202ENSMUST00000067414 13117 ntAPPRIS P2 TSL 5 BASIC9.42□□□□□ -0.9
Smco3Q8BQM7 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC9.42□□□□□ -0.9
Smco3Q8BQM7 Pcsk9-201ENSMUST00000049507 3521 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Smco3Q8BQM7 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smco3Q8BQM7 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Smco3Q8BQM7 Frmd4a-219ENSMUST00000177457 6538 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Smco3Q8BQM7 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smco3Q8BQM7 Rasgef1a-203ENSMUST00000203804 2183 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Smco3Q8BQM7 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smco3Q8BQM7 Gm5380-201ENSMUST00000119296 2136 ntBASIC9.41□□□□□ -0.9
Smco3Q8BQM7 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smco3Q8BQM7 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Smco3Q8BQM7 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Smco3Q8BQM7 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smco3Q8BQM7 Zcchc7-203ENSMUST00000107824 2503 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Smco3Q8BQM7 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smco3Q8BQM7 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smco3Q8BQM7 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Smco3Q8BQM7 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC9.41□□□□□ -0.9
Smco3Q8BQM7 Ccdc40-201ENSMUST00000035935 4979 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smco3Q8BQM7 Nufip2-204ENSMUST00000181023 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smco3Q8BQM7 Cnr2-202ENSMUST00000097843 3867 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smco3Q8BQM7 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smco3Q8BQM7 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smco3Q8BQM7 Hist1h1d-201ENSMUST00000045301 7425 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Smco3Q8BQM7 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC9.41□□□□□ -0.9
Smco3Q8BQM7 Gm12058-201ENSMUST00000118614 437 ntBASIC9.41□□□□□ -0.9
Smco3Q8BQM7 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Smco3Q8BQM7 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC9.41□□□□□ -0.9
Smco3Q8BQM7 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC9.41□□□□□ -0.9
Smco3Q8BQM7 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC9.41□□□□□ -0.9
Smco3Q8BQM7 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC9.41□□□□□ -0.9
Smco3Q8BQM7 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC9.41□□□□□ -0.9
Smco3Q8BQM7 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
Smco3Q8BQM7 AC166095.1-201ENSMUST00000223731 1241 ntBASIC9.41□□□□□ -0.9
Smco3Q8BQM7 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smco3Q8BQM7 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smco3Q8BQM7 Gm10254-201ENSMUST00000052888 867 ntBASIC9.41□□□□□ -0.9
Smco3Q8BQM7 Gm9996-201ENSMUST00000070359 913 ntBASIC9.41□□□□□ -0.9
Smco3Q8BQM7 n-R5s195-201ENSMUST00000082891 119 ntBASIC9.41□□□□□ -0.9
Smco3Q8BQM7 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC9.41□□□□□ -0.9
Smco3Q8BQM7 Mybpc3-201ENSMUST00000111430 4154 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Smco3Q8BQM7 Sh3rf2-201ENSMUST00000072008 5092 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smco3Q8BQM7 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Smco3Q8BQM7 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC9.41□□□□□ -0.9
Smco3Q8BQM7 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smco3Q8BQM7 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smco3Q8BQM7 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smco3Q8BQM7 Adgra1-201ENSMUST00000026548 4758 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smco3Q8BQM7 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC9.41□□□□□ -0.9
Smco3Q8BQM7 AC123857.2-201ENSMUST00000225756 1582 ntBASIC9.41□□□□□ -0.9
Smco3Q8BQM7 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Smco3Q8BQM7 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Smco3Q8BQM7 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms