Protein–RNA interactions for Protein: Q8BJQ2

Usp1, Ubiquitin carboxyl-terminal hydrolase 1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp1Q8BJQ2 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC12.24□□□□□ -0.45
Usp1Q8BJQ2 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Usp1Q8BJQ2 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Usp1Q8BJQ2 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Usp1Q8BJQ2 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Usp1Q8BJQ2 Gm22877-201ENSMUST00000175451 105 ntBASIC12.24□□□□□ -0.45
Usp1Q8BJQ2 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Usp1Q8BJQ2 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC12.24□□□□□ -0.45
Usp1Q8BJQ2 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC12.24□□□□□ -0.45
Usp1Q8BJQ2 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Usp1Q8BJQ2 Gm3619-201ENSMUST00000219947 775 ntBASIC12.24□□□□□ -0.45
Usp1Q8BJQ2 AC102368.1-201ENSMUST00000227161 892 ntBASIC12.24□□□□□ -0.45
Usp1Q8BJQ2 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Usp1Q8BJQ2 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Usp1Q8BJQ2 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Usp1Q8BJQ2 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Usp1Q8BJQ2 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Usp1Q8BJQ2 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Usp1Q8BJQ2 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Usp1Q8BJQ2 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.24□□□□□ -0.45
Usp1Q8BJQ2 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
Usp1Q8BJQ2 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Usp1Q8BJQ2 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Usp1Q8BJQ2 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC12.24□□□□□ -0.45
Usp1Q8BJQ2 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usp1Q8BJQ2 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usp1Q8BJQ2 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usp1Q8BJQ2 Gm5859-201ENSMUST00000165401 2324 ntBASIC12.23□□□□□ -0.45
Usp1Q8BJQ2 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Usp1Q8BJQ2 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Usp1Q8BJQ2 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC12.23□□□□□ -0.45
Usp1Q8BJQ2 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usp1Q8BJQ2 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Usp1Q8BJQ2 Gm37744-201ENSMUST00000194616 1590 ntBASIC12.23□□□□□ -0.45
Usp1Q8BJQ2 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Usp1Q8BJQ2 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
Usp1Q8BJQ2 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usp1Q8BJQ2 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usp1Q8BJQ2 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Usp1Q8BJQ2 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usp1Q8BJQ2 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
Usp1Q8BJQ2 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Usp1Q8BJQ2 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Usp1Q8BJQ2 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC12.23□□□□□ -0.45
Usp1Q8BJQ2 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC12.23□□□□□ -0.45
Usp1Q8BJQ2 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC12.23□□□□□ -0.45
Usp1Q8BJQ2 Mir6407-201ENSMUST00000184510 101 ntBASIC12.23□□□□□ -0.45
Usp1Q8BJQ2 Gm29410-201ENSMUST00000188383 694 ntBASIC12.23□□□□□ -0.45
Usp1Q8BJQ2 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Usp1Q8BJQ2 Gm9116-201ENSMUST00000192400 1018 ntBASIC12.23□□□□□ -0.45
Usp1Q8BJQ2 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC12.23□□□□□ -0.45
Usp1Q8BJQ2 Gm42599-201ENSMUST00000201308 469 ntBASIC12.23□□□□□ -0.45
Usp1Q8BJQ2 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.23□□□□□ -0.45
Usp1Q8BJQ2 Gm9139-201ENSMUST00000218817 700 ntBASIC12.23□□□□□ -0.45
Usp1Q8BJQ2 AC154184.3-201ENSMUST00000225620 1090 ntBASIC12.23□□□□□ -0.45
Usp1Q8BJQ2 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Usp1Q8BJQ2 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usp1Q8BJQ2 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usp1Q8BJQ2 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usp1Q8BJQ2 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Usp1Q8BJQ2 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usp1Q8BJQ2 AC154404.1-201ENSMUST00000223601 2077 ntBASIC12.23□□□□□ -0.45
Usp1Q8BJQ2 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Usp1Q8BJQ2 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usp1Q8BJQ2 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usp1Q8BJQ2 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usp1Q8BJQ2 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usp1Q8BJQ2 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usp1Q8BJQ2 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Usp1Q8BJQ2 Gm21358-201ENSMUST00000191645 1659 ntBASIC12.22□□□□□ -0.45
Usp1Q8BJQ2 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Usp1Q8BJQ2 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Usp1Q8BJQ2 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Usp1Q8BJQ2 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Usp1Q8BJQ2 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.22□□□□□ -0.45
Usp1Q8BJQ2 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Usp1Q8BJQ2 Gm7278-201ENSMUST00000119836 1401 ntBASIC12.22□□□□□ -0.45
Usp1Q8BJQ2 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.22□□□□□ -0.45
Usp1Q8BJQ2 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Usp1Q8BJQ2 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Usp1Q8BJQ2 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Usp1Q8BJQ2 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Usp1Q8BJQ2 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Usp1Q8BJQ2 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Usp1Q8BJQ2 n-R5s84-201ENSMUST00000122591 109 ntBASIC12.22□□□□□ -0.45
Usp1Q8BJQ2 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC12.22□□□□□ -0.45
Usp1Q8BJQ2 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Usp1Q8BJQ2 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC12.22□□□□□ -0.45
Usp1Q8BJQ2 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC12.22□□□□□ -0.45
Usp1Q8BJQ2 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC12.22□□□□□ -0.45
Usp1Q8BJQ2 AC124457.1-201ENSMUST00000198845 120 ntBASIC12.22□□□□□ -0.45
Usp1Q8BJQ2 Gm7504-201ENSMUST00000201449 424 ntBASIC12.22□□□□□ -0.45
Usp1Q8BJQ2 Gm3017-201ENSMUST00000203603 1126 ntBASIC12.22□□□□□ -0.45
Usp1Q8BJQ2 Gm43930-201ENSMUST00000203868 845 ntBASIC12.22□□□□□ -0.45
Usp1Q8BJQ2 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC12.22□□□□□ -0.45
Usp1Q8BJQ2 Ap3s1-202ENSMUST00000224622 978 ntBASIC12.22□□□□□ -0.45
Usp1Q8BJQ2 Lgi3-203ENSMUST00000226548 1001 ntBASIC12.22□□□□□ -0.45
Usp1Q8BJQ2 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Usp1Q8BJQ2 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Usp1Q8BJQ2 Gm25517-201ENSMUST00000083865 134 ntBASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms