Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 AA914427-201ENSMUST00000193194 1166 ntBASIC11.73□□□□□ -0.53
Chmp2bQ8BJF9 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC11.73□□□□□ -0.53
Chmp2bQ8BJF9 Gm43966-201ENSMUST00000203301 612 ntBASIC11.73□□□□□ -0.53
Chmp2bQ8BJF9 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp2bQ8BJF9 Gm43908-201ENSMUST00000205074 1472 ntBASIC11.73□□□□□ -0.53
Chmp2bQ8BJF9 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp2bQ8BJF9 Gm17827-201ENSMUST00000211825 742 ntBASIC11.73□□□□□ -0.53
Chmp2bQ8BJF9 Gm9797-202ENSMUST00000218003 294 ntBASIC11.73□□□□□ -0.53
Chmp2bQ8BJF9 AC134869.4-202ENSMUST00000224350 837 ntBASIC11.73□□□□□ -0.53
Chmp2bQ8BJF9 AC123665.1-201ENSMUST00000228204 438 ntBASIC11.73□□□□□ -0.53
Chmp2bQ8BJF9 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp2bQ8BJF9 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp2bQ8BJF9 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp2bQ8BJF9 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp2bQ8BJF9 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Chmp2bQ8BJF9 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp2bQ8BJF9 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp2bQ8BJF9 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp2bQ8BJF9 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp2bQ8BJF9 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC11.73□□□□□ -0.53
Chmp2bQ8BJF9 Gm43999-201ENSMUST00000204286 2889 ntBASIC11.73□□□□□ -0.53
Chmp2bQ8BJF9 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp2bQ8BJF9 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp2bQ8BJF9 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp2bQ8BJF9 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chmp2bQ8BJF9 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chmp2bQ8BJF9 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chmp2bQ8BJF9 AC153380.1-201ENSMUST00000214959 2364 ntBASIC11.72□□□□□ -0.53
Chmp2bQ8BJF9 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chmp2bQ8BJF9 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chmp2bQ8BJF9 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chmp2bQ8BJF9 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chmp2bQ8BJF9 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Chmp2bQ8BJF9 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Chmp2bQ8BJF9 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chmp2bQ8BJF9 Fsd2-201ENSMUST00000042318 3985 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Chmp2bQ8BJF9 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Chmp2bQ8BJF9 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chmp2bQ8BJF9 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Chmp2bQ8BJF9 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Chmp2bQ8BJF9 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC11.72□□□□□ -0.53
Chmp2bQ8BJF9 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chmp2bQ8BJF9 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Chmp2bQ8BJF9 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chmp2bQ8BJF9 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Chmp2bQ8BJF9 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Chmp2bQ8BJF9 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chmp2bQ8BJF9 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chmp2bQ8BJF9 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Chmp2bQ8BJF9 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Chmp2bQ8BJF9 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Chmp2bQ8BJF9 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
Chmp2bQ8BJF9 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Chmp2bQ8BJF9 Gm11509-201ENSMUST00000117358 325 ntBASIC11.72□□□□□ -0.53
Chmp2bQ8BJF9 Gm14071-201ENSMUST00000117817 509 ntBASIC11.72□□□□□ -0.53
Chmp2bQ8BJF9 Gm11500-201ENSMUST00000118237 601 ntBASIC11.72□□□□□ -0.53
Chmp2bQ8BJF9 Gm13326-201ENSMUST00000118730 1011 ntBASIC11.72□□□□□ -0.53
Chmp2bQ8BJF9 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Chmp2bQ8BJF9 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC11.72□□□□□ -0.53
Chmp2bQ8BJF9 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC11.72□□□□□ -0.53
Chmp2bQ8BJF9 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Chmp2bQ8BJF9 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC11.72□□□□□ -0.53
Chmp2bQ8BJF9 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Chmp2bQ8BJF9 Gm6548-201ENSMUST00000167498 1165 ntBASIC11.72□□□□□ -0.53
Chmp2bQ8BJF9 Ighv5-7-201ENSMUST00000192302 244 ntBASIC11.72□□□□□ -0.53
Chmp2bQ8BJF9 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Chmp2bQ8BJF9 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chmp2bQ8BJF9 Gm4157-201ENSMUST00000211647 679 ntBASIC11.72□□□□□ -0.53
Chmp2bQ8BJF9 Aprt-ps-201ENSMUST00000212311 505 ntBASIC11.72□□□□□ -0.53
Chmp2bQ8BJF9 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Chmp2bQ8BJF9 AC159896.2-201ENSMUST00000214753 269 ntBASIC11.72□□□□□ -0.53
Chmp2bQ8BJF9 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Chmp2bQ8BJF9 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Chmp2bQ8BJF9 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chmp2bQ8BJF9 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC11.72□□□□□ -0.53
Chmp2bQ8BJF9 Gm8399-201ENSMUST00000082300 1117 ntBASIC11.72□□□□□ -0.53
Chmp2bQ8BJF9 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chmp2bQ8BJF9 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Chmp2bQ8BJF9 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chmp2bQ8BJF9 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chmp2bQ8BJF9 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chmp2bQ8BJF9 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chmp2bQ8BJF9 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Chmp2bQ8BJF9 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chmp2bQ8BJF9 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chmp2bQ8BJF9 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Chmp2bQ8BJF9 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chmp2bQ8BJF9 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chmp2bQ8BJF9 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chmp2bQ8BJF9 Gm37122-201ENSMUST00000195313 1567 ntBASIC11.71□□□□□ -0.53
Chmp2bQ8BJF9 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC11.71□□□□□ -0.53
Chmp2bQ8BJF9 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chmp2bQ8BJF9 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chmp2bQ8BJF9 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chmp2bQ8BJF9 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chmp2bQ8BJF9 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chmp2bQ8BJF9 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chmp2bQ8BJF9 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Chmp2bQ8BJF9 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.53
Chmp2bQ8BJF9 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms