Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc116Q80X53 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC11.26□□□□□ -0.61
Ccdc116Q80X53 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC11.26□□□□□ -0.61
Ccdc116Q80X53 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Ccdc116Q80X53 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC11.26□□□□□ -0.61
Ccdc116Q80X53 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc116Q80X53 Gm10807-201ENSMUST00000177134 795 ntBASIC11.26□□□□□ -0.61
Ccdc116Q80X53 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc116Q80X53 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc116Q80X53 Gm4978-201ENSMUST00000071565 801 ntBASIC11.26□□□□□ -0.61
Ccdc116Q80X53 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc116Q80X53 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc116Q80X53 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc116Q80X53 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc116Q80X53 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc116Q80X53 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc116Q80X53 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc116Q80X53 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc116Q80X53 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc116Q80X53 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc116Q80X53 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc116Q80X53 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC11.26□□□□□ -0.61
Ccdc116Q80X53 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Ccdc116Q80X53 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc116Q80X53 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Ccdc116Q80X53 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC11.26□□□□□ -0.61
Ccdc116Q80X53 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Ccdc116Q80X53 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Ccdc116Q80X53 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc116Q80X53 CU062626.3-201ENSMUST00000225522 1411 ntBASIC11.26□□□□□ -0.61
Ccdc116Q80X53 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc116Q80X53 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc116Q80X53 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc116Q80X53 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc116Q80X53 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc116Q80X53 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc116Q80X53 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc116Q80X53 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Ccdc116Q80X53 Mir877-201ENSMUST00000104738 85 ntBASIC11.25□□□□□ -0.61
Ccdc116Q80X53 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc116Q80X53 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc116Q80X53 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC11.25□□□□□ -0.61
Ccdc116Q80X53 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc116Q80X53 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc116Q80X53 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC11.25□□□□□ -0.61
Ccdc116Q80X53 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc116Q80X53 Gm8100-201ENSMUST00000182906 988 ntBASIC11.25□□□□□ -0.61
Ccdc116Q80X53 Gm27552-201ENSMUST00000183351 62 ntBASIC11.25□□□□□ -0.61
Ccdc116Q80X53 Gm27844-201ENSMUST00000183613 62 ntBASIC11.25□□□□□ -0.61
Ccdc116Q80X53 Gm2260-201ENSMUST00000184965 657 ntBASIC11.25□□□□□ -0.61
Ccdc116Q80X53 Mir6420-201ENSMUST00000185032 102 ntBASIC11.25□□□□□ -0.61
Ccdc116Q80X53 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc116Q80X53 Gm4857-201ENSMUST00000192718 785 ntBASIC11.25□□□□□ -0.61
Ccdc116Q80X53 Gm38319-201ENSMUST00000194537 1266 ntBASIC11.25□□□□□ -0.61
Ccdc116Q80X53 Gstp-ps-201ENSMUST00000195526 631 ntBASIC11.25□□□□□ -0.61
Ccdc116Q80X53 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC11.25□□□□□ -0.61
Ccdc116Q80X53 Gm2965-201ENSMUST00000198365 343 ntBASIC11.25□□□□□ -0.61
Ccdc116Q80X53 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc116Q80X53 AC129323.1-201ENSMUST00000216733 470 ntBASIC11.25□□□□□ -0.61
Ccdc116Q80X53 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc116Q80X53 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC11.25□□□□□ -0.61
Ccdc116Q80X53 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc116Q80X53 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Ccdc116Q80X53 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc116Q80X53 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc116Q80X53 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC11.25□□□□□ -0.61
Ccdc116Q80X53 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC11.25□□□□□ -0.61
Ccdc116Q80X53 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc116Q80X53 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc116Q80X53 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC11.25□□□□□ -0.61
Ccdc116Q80X53 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc116Q80X53 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc116Q80X53 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc116Q80X53 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC11.25□□□□□ -0.61
Ccdc116Q80X53 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc116Q80X53 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Ccdc116Q80X53 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
Ccdc116Q80X53 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc116Q80X53 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc116Q80X53 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc116Q80X53 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccdc116Q80X53 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Ccdc116Q80X53 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Ccdc116Q80X53 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Ccdc116Q80X53 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC11.24□□□□□ -0.61
Ccdc116Q80X53 Gm5380-201ENSMUST00000119296 2136 ntBASIC11.24□□□□□ -0.61
Ccdc116Q80X53 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
Ccdc116Q80X53 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccdc116Q80X53 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC11.24□□□□□ -0.61
Ccdc116Q80X53 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccdc116Q80X53 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccdc116Q80X53 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccdc116Q80X53 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccdc116Q80X53 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccdc116Q80X53 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccdc116Q80X53 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccdc116Q80X53 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC11.24□□□□□ -0.61
Ccdc116Q80X53 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccdc116Q80X53 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccdc116Q80X53 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms