Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC13.03□□□□□ -0.32
Ddx55Q6ZPL9 Nps-202ENSMUST00000210697 1082 ntTSL 5 BASIC13.03□□□□□ -0.32
Ddx55Q6ZPL9 Gm20735-202ENSMUST00000212387 519 ntTSL 2 BASIC13.03□□□□□ -0.32
Ddx55Q6ZPL9 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Ddx55Q6ZPL9 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ddx55Q6ZPL9 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ddx55Q6ZPL9 Gm13271-201ENSMUST00000094992 549 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Ddx55Q6ZPL9 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ddx55Q6ZPL9 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ddx55Q6ZPL9 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Ddx55Q6ZPL9 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Ddx55Q6ZPL9 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC13.03□□□□□ -0.32
Ddx55Q6ZPL9 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC13.03□□□□□ -0.32
Ddx55Q6ZPL9 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ddx55Q6ZPL9 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ddx55Q6ZPL9 Gm37651-201ENSMUST00000194679 1494 ntBASIC13.03□□□□□ -0.32
Ddx55Q6ZPL9 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ddx55Q6ZPL9 Lonp2-207ENSMUST00000163987 1556 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ddx55Q6ZPL9 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ddx55Q6ZPL9 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ddx55Q6ZPL9 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ddx55Q6ZPL9 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ddx55Q6ZPL9 Gm44241-201ENSMUST00000203230 1662 ntBASIC13.02□□□□□ -0.32
Ddx55Q6ZPL9 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Ddx55Q6ZPL9 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Ddx55Q6ZPL9 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ddx55Q6ZPL9 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ddx55Q6ZPL9 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ddx55Q6ZPL9 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ddx55Q6ZPL9 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC13.02□□□□□ -0.33
Ddx55Q6ZPL9 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ddx55Q6ZPL9 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Ddx55Q6ZPL9 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ddx55Q6ZPL9 Gm12461-201ENSMUST00000120231 1239 ntBASIC13.02□□□□□ -0.33
Ddx55Q6ZPL9 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC13.02□□□□□ -0.33
Ddx55Q6ZPL9 2610016A17Rik-201ENSMUST00000185211 474 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ddx55Q6ZPL9 Gm6606-201ENSMUST00000193613 947 ntBASIC13.02□□□□□ -0.33
Ddx55Q6ZPL9 Gm13539-202ENSMUST00000211245 552 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Ddx55Q6ZPL9 Chordc1-202ENSMUST00000213605 519 ntTSL 2 BASIC13.02□□□□□ -0.33
Ddx55Q6ZPL9 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ddx55Q6ZPL9 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Ddx55Q6ZPL9 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ddx55Q6ZPL9 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ddx55Q6ZPL9 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
Ddx55Q6ZPL9 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ddx55Q6ZPL9 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ddx55Q6ZPL9 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ddx55Q6ZPL9 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ddx55Q6ZPL9 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ddx55Q6ZPL9 Gm15519-201ENSMUST00000120088 1566 ntBASIC13.02□□□□□ -0.33
Ddx55Q6ZPL9 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ddx55Q6ZPL9 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ddx55Q6ZPL9 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ddx55Q6ZPL9 Gm5422-201ENSMUST00000050717 2721 ntBASIC13.02□□□□□ -0.33
Ddx55Q6ZPL9 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ddx55Q6ZPL9 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ddx55Q6ZPL9 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ddx55Q6ZPL9 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
Ddx55Q6ZPL9 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ddx55Q6ZPL9 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Ddx55Q6ZPL9 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ddx55Q6ZPL9 Gm9244-201ENSMUST00000056767 2129 ntBASIC13.01□□□□□ -0.33
Ddx55Q6ZPL9 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ddx55Q6ZPL9 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ddx55Q6ZPL9 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ddx55Q6ZPL9 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Ddx55Q6ZPL9 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ddx55Q6ZPL9 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ddx55Q6ZPL9 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC13.01□□□□□ -0.33
Ddx55Q6ZPL9 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC13.01□□□□□ -0.33
Ddx55Q6ZPL9 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ddx55Q6ZPL9 Mir181d-201ENSMUST00000102383 72 ntBASIC13.01□□□□□ -0.33
Ddx55Q6ZPL9 Gm14398-201ENSMUST00000117287 1073 ntBASIC13.01□□□□□ -0.33
Ddx55Q6ZPL9 Gm15617-201ENSMUST00000118973 771 ntBASIC13.01□□□□□ -0.33
Ddx55Q6ZPL9 Isg20-203ENSMUST00000120331 845 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ddx55Q6ZPL9 Gm14055-201ENSMUST00000130262 668 ntTSL 5 BASIC13.01□□□□□ -0.33
Ddx55Q6ZPL9 Aknaos-201ENSMUST00000144095 1104 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ddx55Q6ZPL9 Gm23675-201ENSMUST00000157311 125 ntBASIC13.01□□□□□ -0.33
Ddx55Q6ZPL9 Cdhr4-208ENSMUST00000176373 492 ntTSL 5 BASIC13.01□□□□□ -0.33
Ddx55Q6ZPL9 Gm9625-201ENSMUST00000180422 955 ntBASIC13.01□□□□□ -0.33
Ddx55Q6ZPL9 P4htm-204ENSMUST00000193621 1297 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ddx55Q6ZPL9 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC13.01□□□□□ -0.33
Ddx55Q6ZPL9 CT030135.2-201ENSMUST00000225255 893 ntBASIC13.01□□□□□ -0.33
Ddx55Q6ZPL9 Gm26782-203ENSMUST00000227103 751 ntBASIC13.01□□□□□ -0.33
Ddx55Q6ZPL9 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ddx55Q6ZPL9 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ddx55Q6ZPL9 Gm7589-201ENSMUST00000085631 534 ntBASIC13.01□□□□□ -0.33
Ddx55Q6ZPL9 Gm13871-202ENSMUST00000107319 1324 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ddx55Q6ZPL9 Gm11757-202ENSMUST00000107321 1324 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ddx55Q6ZPL9 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ddx55Q6ZPL9 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ddx55Q6ZPL9 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ddx55Q6ZPL9 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ddx55Q6ZPL9 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ddx55Q6ZPL9 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ddx55Q6ZPL9 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ddx55Q6ZPL9 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ddx55Q6ZPL9 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ddx55Q6ZPL9 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ddx55Q6ZPL9 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms