Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Scaf4Q6PFF0 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC11.29□□□□□ -0.6
Scaf4Q6PFF0 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Scaf4Q6PFF0 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Scaf4Q6PFF0 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Scaf4Q6PFF0 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Scaf4Q6PFF0 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Scaf4Q6PFF0 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Scaf4Q6PFF0 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Scaf4Q6PFF0 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Scaf4Q6PFF0 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Scaf4Q6PFF0 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC11.29□□□□□ -0.6
Scaf4Q6PFF0 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Scaf4Q6PFF0 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Scaf4Q6PFF0 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Scaf4Q6PFF0 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC11.29□□□□□ -0.6
Scaf4Q6PFF0 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Scaf4Q6PFF0 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Scaf4Q6PFF0 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Scaf4Q6PFF0 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Scaf4Q6PFF0 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Scaf4Q6PFF0 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Scaf4Q6PFF0 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Scaf4Q6PFF0 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Scaf4Q6PFF0 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Scaf4Q6PFF0 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Scaf4Q6PFF0 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Scaf4Q6PFF0 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Scaf4Q6PFF0 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Scaf4Q6PFF0 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Scaf4Q6PFF0 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC11.28□□□□□ -0.6
Scaf4Q6PFF0 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Scaf4Q6PFF0 Gm37031-201ENSMUST00000195487 2530 ntBASIC11.28□□□□□ -0.6
Scaf4Q6PFF0 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Scaf4Q6PFF0 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Scaf4Q6PFF0 Gm14109-201ENSMUST00000118814 309 ntBASIC11.28□□□□□ -0.6
Scaf4Q6PFF0 Gm11222-201ENSMUST00000119005 738 ntBASIC11.28□□□□□ -0.6
Scaf4Q6PFF0 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Scaf4Q6PFF0 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC11.28□□□□□ -0.6
Scaf4Q6PFF0 Gm20495-201ENSMUST00000173902 235 ntBASIC11.28□□□□□ -0.6
Scaf4Q6PFF0 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC11.28□□□□□ -0.6
Scaf4Q6PFF0 Gm31256-201ENSMUST00000194705 506 ntBASIC11.28□□□□□ -0.6
Scaf4Q6PFF0 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Scaf4Q6PFF0 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC11.28□□□□□ -0.6
Scaf4Q6PFF0 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Scaf4Q6PFF0 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Scaf4Q6PFF0 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Scaf4Q6PFF0 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC11.28□□□□□ -0.6
Scaf4Q6PFF0 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Scaf4Q6PFF0 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Scaf4Q6PFF0 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Scaf4Q6PFF0 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Scaf4Q6PFF0 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Scaf4Q6PFF0 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC11.28□□□□□ -0.6
Scaf4Q6PFF0 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Scaf4Q6PFF0 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Scaf4Q6PFF0 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Scaf4Q6PFF0 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Scaf4Q6PFF0 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.6
Scaf4Q6PFF0 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Scaf4Q6PFF0 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Scaf4Q6PFF0 AC166359.1-201ENSMUST00000220243 1871 ntBASIC11.27□□□□□ -0.6
Scaf4Q6PFF0 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Scaf4Q6PFF0 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Scaf4Q6PFF0 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Scaf4Q6PFF0 Gm44190-201ENSMUST00000205083 1401 ntBASIC11.27□□□□□ -0.6
Scaf4Q6PFF0 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Scaf4Q6PFF0 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Scaf4Q6PFF0 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Scaf4Q6PFF0 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Scaf4Q6PFF0 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Scaf4Q6PFF0 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Scaf4Q6PFF0 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Scaf4Q6PFF0 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Scaf4Q6PFF0 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Scaf4Q6PFF0 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Scaf4Q6PFF0 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC11.27□□□□□ -0.61
Scaf4Q6PFF0 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC11.27□□□□□ -0.61
Scaf4Q6PFF0 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC11.27□□□□□ -0.61
Scaf4Q6PFF0 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Scaf4Q6PFF0 Gm15824-201ENSMUST00000119516 955 ntBASIC11.27□□□□□ -0.61
Scaf4Q6PFF0 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC11.27□□□□□ -0.61
Scaf4Q6PFF0 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Scaf4Q6PFF0 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC11.27□□□□□ -0.61
Scaf4Q6PFF0 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
Scaf4Q6PFF0 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Scaf4Q6PFF0 Gm32999-201ENSMUST00000192693 562 ntBASIC11.27□□□□□ -0.61
Scaf4Q6PFF0 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC11.27□□□□□ -0.61
Scaf4Q6PFF0 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC11.27□□□□□ -0.61
Scaf4Q6PFF0 Gm9797-202ENSMUST00000218003 294 ntBASIC11.27□□□□□ -0.61
Scaf4Q6PFF0 AC130829.1-201ENSMUST00000221548 494 ntBASIC11.27□□□□□ -0.61
Scaf4Q6PFF0 CT025533.2-201ENSMUST00000228715 1248 ntBASIC11.27□□□□□ -0.61
Scaf4Q6PFF0 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Scaf4Q6PFF0 Gm8399-201ENSMUST00000082300 1117 ntBASIC11.27□□□□□ -0.61
Scaf4Q6PFF0 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Scaf4Q6PFF0 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Scaf4Q6PFF0 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Scaf4Q6PFF0 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Scaf4Q6PFF0 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Scaf4Q6PFF0 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms