Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smarcc2Q6PDG5 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Smarcc2Q6PDG5 Gm45496-201ENSMUST00000209918 2917 ntBASIC13.38□□□□□ -0.27
Smarcc2Q6PDG5 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smarcc2Q6PDG5 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smarcc2Q6PDG5 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Smarcc2Q6PDG5 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smarcc2Q6PDG5 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Smarcc2Q6PDG5 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Smarcc2Q6PDG5 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC13.38□□□□□ -0.27
Smarcc2Q6PDG5 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Smarcc2Q6PDG5 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC13.37□□□□□ -0.27
Smarcc2Q6PDG5 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcc2Q6PDG5 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcc2Q6PDG5 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcc2Q6PDG5 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcc2Q6PDG5 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcc2Q6PDG5 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcc2Q6PDG5 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcc2Q6PDG5 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcc2Q6PDG5 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcc2Q6PDG5 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Smarcc2Q6PDG5 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC13.37□□□□□ -0.27
Smarcc2Q6PDG5 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Smarcc2Q6PDG5 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Smarcc2Q6PDG5 Gm15595-201ENSMUST00000120840 961 ntBASIC13.37□□□□□ -0.27
Smarcc2Q6PDG5 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC13.37□□□□□ -0.27
Smarcc2Q6PDG5 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC13.37□□□□□ -0.27
Smarcc2Q6PDG5 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC13.37□□□□□ -0.27
Smarcc2Q6PDG5 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC13.37□□□□□ -0.27
Smarcc2Q6PDG5 Mir1943-201ENSMUST00000158276 73 ntBASIC13.37□□□□□ -0.27
Smarcc2Q6PDG5 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC13.37□□□□□ -0.27
Smarcc2Q6PDG5 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC13.37□□□□□ -0.27
Smarcc2Q6PDG5 Gm29499-201ENSMUST00000189151 486 ntBASIC13.37□□□□□ -0.27
Smarcc2Q6PDG5 Gm28329-201ENSMUST00000191208 689 ntBASIC13.37□□□□□ -0.27
Smarcc2Q6PDG5 Gm29171-201ENSMUST00000191397 486 ntBASIC13.37□□□□□ -0.27
Smarcc2Q6PDG5 Gm37835-201ENSMUST00000193305 361 ntBASIC13.37□□□□□ -0.27
Smarcc2Q6PDG5 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Smarcc2Q6PDG5 Gm7395-201ENSMUST00000216059 1045 ntBASIC13.37□□□□□ -0.27
Smarcc2Q6PDG5 AC122408.1-201ENSMUST00000218949 218 ntBASIC13.37□□□□□ -0.27
Smarcc2Q6PDG5 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcc2Q6PDG5 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcc2Q6PDG5 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcc2Q6PDG5 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcc2Q6PDG5 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Smarcc2Q6PDG5 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcc2Q6PDG5 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
Smarcc2Q6PDG5 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcc2Q6PDG5 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Smarcc2Q6PDG5 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcc2Q6PDG5 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcc2Q6PDG5 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcc2Q6PDG5 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcc2Q6PDG5 Gm36987-201ENSMUST00000194704 2979 ntBASIC13.37□□□□□ -0.27
Smarcc2Q6PDG5 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcc2Q6PDG5 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcc2Q6PDG5 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Smarcc2Q6PDG5 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcc2Q6PDG5 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcc2Q6PDG5 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcc2Q6PDG5 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcc2Q6PDG5 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
Smarcc2Q6PDG5 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcc2Q6PDG5 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcc2Q6PDG5 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcc2Q6PDG5 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcc2Q6PDG5 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcc2Q6PDG5 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcc2Q6PDG5 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcc2Q6PDG5 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Smarcc2Q6PDG5 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC13.36□□□□□ -0.27
Smarcc2Q6PDG5 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcc2Q6PDG5 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcc2Q6PDG5 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Smarcc2Q6PDG5 Gm14263-201ENSMUST00000117955 746 ntBASIC13.36□□□□□ -0.27
Smarcc2Q6PDG5 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC13.36□□□□□ -0.27
Smarcc2Q6PDG5 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC13.36□□□□□ -0.27
Smarcc2Q6PDG5 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC13.36□□□□□ -0.27
Smarcc2Q6PDG5 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC13.36□□□□□ -0.27
Smarcc2Q6PDG5 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcc2Q6PDG5 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC13.36□□□□□ -0.27
Smarcc2Q6PDG5 Mir7686-201ENSMUST00000200604 57 ntBASIC13.36□□□□□ -0.27
Smarcc2Q6PDG5 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC13.36□□□□□ -0.27
Smarcc2Q6PDG5 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcc2Q6PDG5 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcc2Q6PDG5 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcc2Q6PDG5 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcc2Q6PDG5 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcc2Q6PDG5 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcc2Q6PDG5 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcc2Q6PDG5 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcc2Q6PDG5 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcc2Q6PDG5 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcc2Q6PDG5 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Smarcc2Q6PDG5 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcc2Q6PDG5 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcc2Q6PDG5 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcc2Q6PDG5 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Smarcc2Q6PDG5 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Smarcc2Q6PDG5 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms