Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Nr1h4Q60641 AC167565.1-201ENSMUST00000226980 1833 ntBASIC10.93□□□□□ -0.66
Nr1h4Q60641 Cd300lg-202ENSMUST00000107163 2605 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nr1h4Q60641 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nr1h4Q60641 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nr1h4Q60641 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Nr1h4Q60641 Gm13347-201ENSMUST00000120298 1353 ntBASIC10.93□□□□□ -0.66
Nr1h4Q60641 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nr1h4Q60641 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nr1h4Q60641 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nr1h4Q60641 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
Nr1h4Q60641 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nr1h4Q60641 Sox13-203ENSMUST00000144386 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nr1h4Q60641 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Nr1h4Q60641 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Nr1h4Q60641 Atg16l2-201ENSMUST00000120267 6459 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nr1h4Q60641 Gm21939-201ENSMUST00000221137 2773 ntBASIC10.93□□□□□ -0.66
Nr1h4Q60641 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nr1h4Q60641 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC10.93□□□□□ -0.66
Nr1h4Q60641 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Nr1h4Q60641 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Nr1h4Q60641 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nr1h4Q60641 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nr1h4Q60641 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Nr1h4Q60641 Mir8093-201ENSMUST00000185043 137 ntBASIC10.93□□□□□ -0.66
Nr1h4Q60641 Gm28937-201ENSMUST00000185413 695 ntBASIC10.93□□□□□ -0.66
Nr1h4Q60641 Gm29400-201ENSMUST00000187208 695 ntBASIC10.93□□□□□ -0.66
Nr1h4Q60641 Gm28662-201ENSMUST00000188446 695 ntBASIC10.93□□□□□ -0.66
Nr1h4Q60641 Gm28251-201ENSMUST00000188835 695 ntBASIC10.93□□□□□ -0.66
Nr1h4Q60641 Gm37424-201ENSMUST00000191727 561 ntBASIC10.93□□□□□ -0.66
Nr1h4Q60641 Gm37318-201ENSMUST00000194325 695 ntBASIC10.93□□□□□ -0.66
Nr1h4Q60641 Gm38017-201ENSMUST00000194768 695 ntBASIC10.93□□□□□ -0.66
Nr1h4Q60641 Gm37287-201ENSMUST00000195449 695 ntBASIC10.93□□□□□ -0.66
Nr1h4Q60641 Gm37793-201ENSMUST00000195548 695 ntBASIC10.93□□□□□ -0.66
Nr1h4Q60641 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC10.93□□□□□ -0.66
Nr1h4Q60641 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nr1h4Q60641 Gm43962-201ENSMUST00000203898 190 ntBASIC10.93□□□□□ -0.66
Nr1h4Q60641 Gm45691-201ENSMUST00000206905 1120 ntBASIC10.93□□□□□ -0.66
Nr1h4Q60641 AC132384.14-201ENSMUST00000219346 1147 ntBASIC10.93□□□□□ -0.66
Nr1h4Q60641 Olfr1347-205ENSMUST00000220413 964 ntBASIC10.93□□□□□ -0.66
Nr1h4Q60641 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nr1h4Q60641 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Nr1h4Q60641 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nr1h4Q60641 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nr1h4Q60641 Olfr77-202ENSMUST00000217347 5980 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Nr1h4Q60641 Acacb-202ENSMUST00000102582 8788 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Nr1h4Q60641 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nr1h4Q60641 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nr1h4Q60641 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nr1h4Q60641 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Nr1h4Q60641 Egfr-201ENSMUST00000020329 10208 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nr1h4Q60641 Gal3st2-201ENSMUST00000094663 2844 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nr1h4Q60641 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nr1h4Q60641 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nr1h4Q60641 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Nr1h4Q60641 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nr1h4Q60641 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nr1h4Q60641 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC10.92□□□□□ -0.66
Nr1h4Q60641 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Nr1h4Q60641 Slc6a5-203ENSMUST00000207753 6966 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nr1h4Q60641 Mgat5-201ENSMUST00000038361 8436 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nr1h4Q60641 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
Nr1h4Q60641 Adcy7-202ENSMUST00000168545 5937 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nr1h4Q60641 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC10.92□□□□□ -0.66
Nr1h4Q60641 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nr1h4Q60641 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC10.92□□□□□ -0.66
Nr1h4Q60641 Kif3c-201ENSMUST00000020999 6791 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nr1h4Q60641 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Nr1h4Q60641 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nr1h4Q60641 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nr1h4Q60641 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Nr1h4Q60641 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nr1h4Q60641 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Nr1h4Q60641 Gm23270-201ENSMUST00000104055 131 ntBASIC10.92□□□□□ -0.66
Nr1h4Q60641 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Nr1h4Q60641 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Nr1h4Q60641 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nr1h4Q60641 Gm14109-201ENSMUST00000118814 309 ntBASIC10.92□□□□□ -0.66
Nr1h4Q60641 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC10.92□□□□□ -0.66
Nr1h4Q60641 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nr1h4Q60641 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Nr1h4Q60641 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC10.92□□□□□ -0.66
Nr1h4Q60641 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nr1h4Q60641 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC10.92□□□□□ -0.66
Nr1h4Q60641 Gm3329-201ENSMUST00000159873 556 ntBASIC10.92□□□□□ -0.66
Nr1h4Q60641 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC10.92□□□□□ -0.66
Nr1h4Q60641 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC10.92□□□□□ -0.66
Nr1h4Q60641 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Nr1h4Q60641 Gm32999-201ENSMUST00000192693 562 ntBASIC10.92□□□□□ -0.66
Nr1h4Q60641 Igkv2-116-201ENSMUST00000199327 362 ntBASIC10.92□□□□□ -0.66
Nr1h4Q60641 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC10.92□□□□□ -0.66
Nr1h4Q60641 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nr1h4Q60641 Gm35850-202ENSMUST00000211705 2120 ntBASIC10.92□□□□□ -0.66
Nr1h4Q60641 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC10.92□□□□□ -0.66
Nr1h4Q60641 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Nr1h4Q60641 CT025533.2-201ENSMUST00000228715 1248 ntBASIC10.92□□□□□ -0.66
Nr1h4Q60641 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nr1h4Q60641 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nr1h4Q60641 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Nr1h4Q60641 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms