Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trav5d-4Q5R1F6 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Trav5d-4Q5R1F6 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav5d-4Q5R1F6 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Trav5d-4Q5R1F6 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC9.83□□□□□ -0.84
Trav5d-4Q5R1F6 Gm15515-201ENSMUST00000117827 822 ntBASIC9.83□□□□□ -0.84
Trav5d-4Q5R1F6 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC9.83□□□□□ -0.84
Trav5d-4Q5R1F6 Gm12266-201ENSMUST00000120311 962 ntBASIC9.83□□□□□ -0.84
Trav5d-4Q5R1F6 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trav5d-4Q5R1F6 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC9.83□□□□□ -0.84
Trav5d-4Q5R1F6 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC9.83□□□□□ -0.84
Trav5d-4Q5R1F6 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trav5d-4Q5R1F6 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trav5d-4Q5R1F6 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC9.83□□□□□ -0.84
Trav5d-4Q5R1F6 Gm3329-201ENSMUST00000159873 556 ntBASIC9.83□□□□□ -0.84
Trav5d-4Q5R1F6 Gm17040-202ENSMUST00000170597 889 ntBASIC9.83□□□□□ -0.84
Trav5d-4Q5R1F6 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC9.83□□□□□ -0.84
Trav5d-4Q5R1F6 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav5d-4Q5R1F6 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trav5d-4Q5R1F6 Gm27341-201ENSMUST00000183570 106 ntBASIC9.83□□□□□ -0.84
Trav5d-4Q5R1F6 Gm28450-201ENSMUST00000187349 638 ntBASIC9.83□□□□□ -0.84
Trav5d-4Q5R1F6 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC9.83□□□□□ -0.84
Trav5d-4Q5R1F6 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC9.83□□□□□ -0.84
Trav5d-4Q5R1F6 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trav5d-4Q5R1F6 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trav5d-4Q5R1F6 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Trav5d-4Q5R1F6 CT573034.1-201ENSMUST00000222983 313 ntBASIC9.83□□□□□ -0.84
Trav5d-4Q5R1F6 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav5d-4Q5R1F6 Mir219a-1-201ENSMUST00000083621 110 ntBASIC9.83□□□□□ -0.84
Trav5d-4Q5R1F6 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Trav5d-4Q5R1F6 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Trav5d-4Q5R1F6 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trav5d-4Q5R1F6 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav5d-4Q5R1F6 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trav5d-4Q5R1F6 Gm38273-201ENSMUST00000194987 2382 ntBASIC9.83□□□□□ -0.84
Trav5d-4Q5R1F6 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trav5d-4Q5R1F6 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trav5d-4Q5R1F6 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trav5d-4Q5R1F6 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trav5d-4Q5R1F6 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Trav5d-4Q5R1F6 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav5d-4Q5R1F6 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Trav5d-4Q5R1F6 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav5d-4Q5R1F6 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC9.83□□□□□ -0.84
Trav5d-4Q5R1F6 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC9.83□□□□□ -0.84
Trav5d-4Q5R1F6 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav5d-4Q5R1F6 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav5d-4Q5R1F6 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav5d-4Q5R1F6 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav5d-4Q5R1F6 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav5d-4Q5R1F6 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav5d-4Q5R1F6 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC9.82□□□□□ -0.84
Trav5d-4Q5R1F6 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trav5d-4Q5R1F6 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Trav5d-4Q5R1F6 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trav5d-4Q5R1F6 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trav5d-4Q5R1F6 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav5d-4Q5R1F6 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav5d-4Q5R1F6 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav5d-4Q5R1F6 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav5d-4Q5R1F6 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trav5d-4Q5R1F6 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC9.82□□□□□ -0.84
Trav5d-4Q5R1F6 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC9.82□□□□□ -0.84
Trav5d-4Q5R1F6 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav5d-4Q5R1F6 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav5d-4Q5R1F6 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav5d-4Q5R1F6 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC9.82□□□□□ -0.84
Trav5d-4Q5R1F6 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav5d-4Q5R1F6 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav5d-4Q5R1F6 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav5d-4Q5R1F6 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trav5d-4Q5R1F6 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC9.82□□□□□ -0.84
Trav5d-4Q5R1F6 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav5d-4Q5R1F6 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC9.82□□□□□ -0.84
Trav5d-4Q5R1F6 Gm13916-201ENSMUST00000117368 628 ntBASIC9.82□□□□□ -0.84
Trav5d-4Q5R1F6 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC9.82□□□□□ -0.84
Trav5d-4Q5R1F6 Gm13461-201ENSMUST00000120980 662 ntBASIC9.82□□□□□ -0.84
Trav5d-4Q5R1F6 Gm8199-201ENSMUST00000121323 823 ntBASIC9.82□□□□□ -0.84
Trav5d-4Q5R1F6 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trav5d-4Q5R1F6 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav5d-4Q5R1F6 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC9.82□□□□□ -0.84
Trav5d-4Q5R1F6 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC9.82□□□□□ -0.84
Trav5d-4Q5R1F6 Gm20495-201ENSMUST00000173902 235 ntBASIC9.82□□□□□ -0.84
Trav5d-4Q5R1F6 Gm27552-201ENSMUST00000183351 62 ntBASIC9.82□□□□□ -0.84
Trav5d-4Q5R1F6 Gm27844-201ENSMUST00000183613 62 ntBASIC9.82□□□□□ -0.84
Trav5d-4Q5R1F6 Gm42682-201ENSMUST00000198349 1265 ntBASIC9.82□□□□□ -0.84
Trav5d-4Q5R1F6 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav5d-4Q5R1F6 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC9.82□□□□□ -0.84
Trav5d-4Q5R1F6 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC9.82□□□□□ -0.84
Trav5d-4Q5R1F6 CT025694.1-201ENSMUST00000226188 934 ntBASIC9.82□□□□□ -0.84
Trav5d-4Q5R1F6 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav5d-4Q5R1F6 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav5d-4Q5R1F6 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav5d-4Q5R1F6 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav5d-4Q5R1F6 Gm4978-201ENSMUST00000071565 801 ntBASIC9.82□□□□□ -0.84
Trav5d-4Q5R1F6 Mir433-201ENSMUST00000093564 124 ntBASIC9.82□□□□□ -0.84
Trav5d-4Q5R1F6 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav5d-4Q5R1F6 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav5d-4Q5R1F6 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav5d-4Q5R1F6 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms