Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Nlrc4Q3UP24 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nlrc4Q3UP24 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nlrc4Q3UP24 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nlrc4Q3UP24 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nlrc4Q3UP24 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nlrc4Q3UP24 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Nlrc4Q3UP24 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nlrc4Q3UP24 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Nlrc4Q3UP24 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nlrc4Q3UP24 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Nlrc4Q3UP24 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
Nlrc4Q3UP24 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nlrc4Q3UP24 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nlrc4Q3UP24 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nlrc4Q3UP24 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nlrc4Q3UP24 AC154537.1-201ENSMUST00000226101 1304 ntBASIC12.09□□□□□ -0.47
Nlrc4Q3UP24 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC12.09□□□□□ -0.47
Nlrc4Q3UP24 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Nlrc4Q3UP24 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nlrc4Q3UP24 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC12.08□□□□□ -0.48
Nlrc4Q3UP24 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nlrc4Q3UP24 Gm5740-201ENSMUST00000211003 1857 ntBASIC12.08□□□□□ -0.48
Nlrc4Q3UP24 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nlrc4Q3UP24 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nlrc4Q3UP24 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nlrc4Q3UP24 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nlrc4Q3UP24 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nlrc4Q3UP24 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nlrc4Q3UP24 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nlrc4Q3UP24 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Nlrc4Q3UP24 Gm15615-201ENSMUST00000118876 198 ntBASIC12.08□□□□□ -0.48
Nlrc4Q3UP24 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nlrc4Q3UP24 Gm22902-201ENSMUST00000158488 302 ntBASIC12.08□□□□□ -0.48
Nlrc4Q3UP24 Gm9550-201ENSMUST00000161130 862 ntBASIC12.08□□□□□ -0.48
Nlrc4Q3UP24 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nlrc4Q3UP24 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC12.08□□□□□ -0.48
Nlrc4Q3UP24 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC12.08□□□□□ -0.48
Nlrc4Q3UP24 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Nlrc4Q3UP24 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nlrc4Q3UP24 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC12.08□□□□□ -0.48
Nlrc4Q3UP24 Gm45398-201ENSMUST00000210561 165 ntBASIC12.08□□□□□ -0.48
Nlrc4Q3UP24 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC12.08□□□□□ -0.48
Nlrc4Q3UP24 CT030637.1-201ENSMUST00000228016 669 ntBASIC12.08□□□□□ -0.48
Nlrc4Q3UP24 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Nlrc4Q3UP24 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nlrc4Q3UP24 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nlrc4Q3UP24 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nlrc4Q3UP24 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nlrc4Q3UP24 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nlrc4Q3UP24 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nlrc4Q3UP24 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Nlrc4Q3UP24 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nlrc4Q3UP24 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nlrc4Q3UP24 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nlrc4Q3UP24 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nlrc4Q3UP24 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.07□□□□□ -0.48
Nlrc4Q3UP24 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nlrc4Q3UP24 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nlrc4Q3UP24 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nlrc4Q3UP24 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nlrc4Q3UP24 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Nlrc4Q3UP24 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nlrc4Q3UP24 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nlrc4Q3UP24 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nlrc4Q3UP24 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nlrc4Q3UP24 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nlrc4Q3UP24 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nlrc4Q3UP24 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nlrc4Q3UP24 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nlrc4Q3UP24 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nlrc4Q3UP24 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nlrc4Q3UP24 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nlrc4Q3UP24 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nlrc4Q3UP24 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nlrc4Q3UP24 Gm16071-201ENSMUST00000119589 793 ntBASIC12.07□□□□□ -0.48
Nlrc4Q3UP24 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC12.07□□□□□ -0.48
Nlrc4Q3UP24 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC12.07□□□□□ -0.48
Nlrc4Q3UP24 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC12.07□□□□□ -0.48
Nlrc4Q3UP24 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nlrc4Q3UP24 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nlrc4Q3UP24 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC12.07□□□□□ -0.48
Nlrc4Q3UP24 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nlrc4Q3UP24 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nlrc4Q3UP24 Gm5342-201ENSMUST00000181982 1003 ntBASIC12.07□□□□□ -0.48
Nlrc4Q3UP24 Gm17826-201ENSMUST00000189720 798 ntBASIC12.07□□□□□ -0.48
Nlrc4Q3UP24 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nlrc4Q3UP24 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nlrc4Q3UP24 Gm44315-201ENSMUST00000203041 219 ntBASIC12.07□□□□□ -0.48
Nlrc4Q3UP24 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC12.07□□□□□ -0.48
Nlrc4Q3UP24 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC12.07□□□□□ -0.48
Nlrc4Q3UP24 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC12.07□□□□□ -0.48
Nlrc4Q3UP24 Gm5451-201ENSMUST00000080545 579 ntBASIC12.07□□□□□ -0.48
Nlrc4Q3UP24 Gm23105-201ENSMUST00000083719 134 ntBASIC12.07□□□□□ -0.48
Nlrc4Q3UP24 Gm5879-201ENSMUST00000089501 1209 ntBASIC12.07□□□□□ -0.48
Nlrc4Q3UP24 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nlrc4Q3UP24 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nlrc4Q3UP24 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nlrc4Q3UP24 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nlrc4Q3UP24 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms