Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Gm18256-201ENSMUST00000209087 907 ntBASIC14.83□□□□□ -0.04
Sf3b2Q3UJB0 Olfr1335-202ENSMUST00000219094 1148 ntAPPRIS P2 BASIC14.83□□□□□ -0.04
Sf3b2Q3UJB0 AC159261.1-201ENSMUST00000222493 911 ntTSL 2 BASIC14.83□□□□□ -0.04
Sf3b2Q3UJB0 Ngp-201ENSMUST00000035061 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3b2Q3UJB0 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3b2Q3UJB0 Tex33-201ENSMUST00000074380 1147 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3b2Q3UJB0 Olfr1335-201ENSMUST00000084313 1148 ntAPPRIS ALT2 BASIC14.83□□□□□ -0.04
Sf3b2Q3UJB0 Gm10233-201ENSMUST00000089275 628 ntBASIC14.83□□□□□ -0.04
Sf3b2Q3UJB0 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3b2Q3UJB0 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3b2Q3UJB0 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3b2Q3UJB0 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Sf3b2Q3UJB0 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Sf3b2Q3UJB0 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3b2Q3UJB0 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Sf3b2Q3UJB0 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3b2Q3UJB0 Gm17836-201ENSMUST00000191976 1302 ntBASIC14.83□□□□□ -0.04
Sf3b2Q3UJB0 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3b2Q3UJB0 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3b2Q3UJB0 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3b2Q3UJB0 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3b2Q3UJB0 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3b2Q3UJB0 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Sf3b2Q3UJB0 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3b2Q3UJB0 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3b2Q3UJB0 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b2Q3UJB0 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b2Q3UJB0 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b2Q3UJB0 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b2Q3UJB0 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC14.82□□□□□ -0.04
Sf3b2Q3UJB0 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b2Q3UJB0 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b2Q3UJB0 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b2Q3UJB0 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b2Q3UJB0 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b2Q3UJB0 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b2Q3UJB0 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b2Q3UJB0 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC14.82□□□□□ -0.04
Sf3b2Q3UJB0 Srp14-202ENSMUST00000110862 587 ntTSL 2 BASIC14.82□□□□□ -0.04
Sf3b2Q3UJB0 9230111E07Rik-201ENSMUST00000124850 811 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b2Q3UJB0 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b2Q3UJB0 Gm20493-201ENSMUST00000173706 213 ntBASIC14.82□□□□□ -0.04
Sf3b2Q3UJB0 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC14.82□□□□□ -0.04
Sf3b2Q3UJB0 Gm20694-201ENSMUST00000176943 404 ntBASIC14.82□□□□□ -0.04
Sf3b2Q3UJB0 n-R5s130-201ENSMUST00000178128 119 ntBASIC14.82□□□□□ -0.04
Sf3b2Q3UJB0 Gm24312-201ENSMUST00000178677 119 ntBASIC14.82□□□□□ -0.04
Sf3b2Q3UJB0 n-R5s106-201ENSMUST00000179060 119 ntBASIC14.82□□□□□ -0.04
Sf3b2Q3UJB0 n-R5s118-201ENSMUST00000179887 119 ntBASIC14.82□□□□□ -0.04
Sf3b2Q3UJB0 Gm5976-201ENSMUST00000180794 996 ntBASIC14.82□□□□□ -0.04
Sf3b2Q3UJB0 Gm27444-201ENSMUST00000184157 137 ntBASIC14.82□□□□□ -0.04
Sf3b2Q3UJB0 Gm28826-201ENSMUST00000190006 488 ntTSL 2 BASIC14.82□□□□□ -0.04
Sf3b2Q3UJB0 Gm43997-201ENSMUST00000203986 1005 ntBASIC14.82□□□□□ -0.04
Sf3b2Q3UJB0 Clec2h-202ENSMUST00000204416 386 ntTSL 3 BASIC14.82□□□□□ -0.04
Sf3b2Q3UJB0 Chac2-201ENSMUST00000020553 1018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b2Q3UJB0 Calca-207ENSMUST00000206853 720 ntTSL 2 BASIC14.82□□□□□ -0.04
Sf3b2Q3UJB0 Gm45783-201ENSMUST00000210877 656 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
Sf3b2Q3UJB0 Rnasek-201ENSMUST00000040428 611 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b2Q3UJB0 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b2Q3UJB0 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Sf3b2Q3UJB0 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b2Q3UJB0 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Sf3b2Q3UJB0 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b2Q3UJB0 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b2Q3UJB0 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b2Q3UJB0 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b2Q3UJB0 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b2Q3UJB0 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b2Q3UJB0 Gm44190-201ENSMUST00000205083 1401 ntBASIC14.82□□□□□ -0.04
Sf3b2Q3UJB0 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b2Q3UJB0 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Sf3b2Q3UJB0 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC14.82□□□□□ -0.04
Sf3b2Q3UJB0 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b2Q3UJB0 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b2Q3UJB0 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3b2Q3UJB0 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3b2Q3UJB0 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3b2Q3UJB0 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Sf3b2Q3UJB0 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3b2Q3UJB0 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3b2Q3UJB0 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Sf3b2Q3UJB0 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3b2Q3UJB0 Sfi1-204ENSMUST00000118627 831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3b2Q3UJB0 Gm15172-201ENSMUST00000118945 1046 ntBASIC14.81□□□□□ -0.04
Sf3b2Q3UJB0 Gm15287-201ENSMUST00000132564 751 ntTSL 2 BASIC14.81□□□□□ -0.04
Sf3b2Q3UJB0 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3b2Q3UJB0 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
Sf3b2Q3UJB0 Gm26174-201ENSMUST00000158415 219 ntBASIC14.81□□□□□ -0.04
Sf3b2Q3UJB0 Gm23582-201ENSMUST00000158530 139 ntBASIC14.81□□□□□ -0.04
Sf3b2Q3UJB0 Gm18733-202ENSMUST00000174447 401 ntBASIC14.81□□□□□ -0.04
Sf3b2Q3UJB0 Gm5210-201ENSMUST00000182150 1010 ntBASIC14.81□□□□□ -0.04
Sf3b2Q3UJB0 2310009A05Rik-201ENSMUST00000184126 496 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3b2Q3UJB0 Prm2-202ENSMUST00000189593 674 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Sf3b2Q3UJB0 Gm43460-201ENSMUST00000202491 1057 ntBASIC14.81□□□□□ -0.04
Sf3b2Q3UJB0 Gm45060-201ENSMUST00000203293 593 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3b2Q3UJB0 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC14.81□□□□□ -0.04
Sf3b2Q3UJB0 AC241616.1-201ENSMUST00000213741 166 ntBASIC14.81□□□□□ -0.04
Sf3b2Q3UJB0 Nqo2-203ENSMUST00000220844 957 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3b2Q3UJB0 Ttc24-202ENSMUST00000064550 671 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3b2Q3UJB0 Klk1b24-201ENSMUST00000073713 878 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3b2Q3UJB0 Klk1b21-201ENSMUST00000085455 871 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms