Protein–RNA interactions for Protein: Q3U4B1

Ssbp4, Single stranded DNA binding protein 4, isoform CRA_b, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp4Q3U4B1 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC9.67□□□□□ -0.86
Ssbp4Q3U4B1 Gm4294-201ENSMUST00000105169 614 ntBASIC9.67□□□□□ -0.86
Ssbp4Q3U4B1 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ssbp4Q3U4B1 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC9.67□□□□□ -0.86
Ssbp4Q3U4B1 Gm12899-201ENSMUST00000120565 551 ntBASIC9.67□□□□□ -0.86
Ssbp4Q3U4B1 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC9.67□□□□□ -0.86
Ssbp4Q3U4B1 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Ssbp4Q3U4B1 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Ssbp4Q3U4B1 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC9.67□□□□□ -0.86
Ssbp4Q3U4B1 Mir1956-201ENSMUST00000157748 65 ntBASIC9.67□□□□□ -0.86
Ssbp4Q3U4B1 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC9.67□□□□□ -0.86
Ssbp4Q3U4B1 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC9.67□□□□□ -0.86
Ssbp4Q3U4B1 Gm38210-201ENSMUST00000191944 809 ntBASIC9.67□□□□□ -0.86
Ssbp4Q3U4B1 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC9.67□□□□□ -0.86
Ssbp4Q3U4B1 Gm37826-201ENSMUST00000195329 322 ntBASIC9.67□□□□□ -0.86
Ssbp4Q3U4B1 Gm43058-201ENSMUST00000197645 625 ntBASIC9.67□□□□□ -0.86
Ssbp4Q3U4B1 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ssbp4Q3U4B1 Gm35960-201ENSMUST00000202712 767 ntBASIC9.67□□□□□ -0.86
Ssbp4Q3U4B1 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC9.67□□□□□ -0.86
Ssbp4Q3U4B1 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Ssbp4Q3U4B1 Gm10752-201ENSMUST00000218348 729 ntBASIC9.67□□□□□ -0.86
Ssbp4Q3U4B1 Gm5468-202ENSMUST00000227851 682 ntBASIC9.67□□□□□ -0.86
Ssbp4Q3U4B1 AC136376.2-201ENSMUST00000228819 490 ntBASIC9.67□□□□□ -0.86
Ssbp4Q3U4B1 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ssbp4Q3U4B1 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Ssbp4Q3U4B1 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ssbp4Q3U4B1 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Ssbp4Q3U4B1 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Ssbp4Q3U4B1 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ssbp4Q3U4B1 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC9.67□□□□□ -0.86
Ssbp4Q3U4B1 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ssbp4Q3U4B1 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Ssbp4Q3U4B1 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ssbp4Q3U4B1 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Ssbp4Q3U4B1 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ssbp4Q3U4B1 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ssbp4Q3U4B1 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC9.66□□□□□ -0.86
Ssbp4Q3U4B1 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ssbp4Q3U4B1 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ssbp4Q3U4B1 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Ssbp4Q3U4B1 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ssbp4Q3U4B1 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ssbp4Q3U4B1 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Ssbp4Q3U4B1 Gm38187-201ENSMUST00000195609 4709 ntBASIC9.66□□□□□ -0.86
Ssbp4Q3U4B1 Gm5740-201ENSMUST00000211003 1857 ntBASIC9.66□□□□□ -0.86
Ssbp4Q3U4B1 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC9.66□□□□□ -0.86
Ssbp4Q3U4B1 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ssbp4Q3U4B1 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ssbp4Q3U4B1 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ssbp4Q3U4B1 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ssbp4Q3U4B1 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ssbp4Q3U4B1 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Ssbp4Q3U4B1 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ssbp4Q3U4B1 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Ssbp4Q3U4B1 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Ssbp4Q3U4B1 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC9.66□□□□□ -0.86
Ssbp4Q3U4B1 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC9.66□□□□□ -0.86
Ssbp4Q3U4B1 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC9.66□□□□□ -0.86
Ssbp4Q3U4B1 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Ssbp4Q3U4B1 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Ssbp4Q3U4B1 Gm20495-201ENSMUST00000173902 235 ntBASIC9.66□□□□□ -0.86
Ssbp4Q3U4B1 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Ssbp4Q3U4B1 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC9.66□□□□□ -0.86
Ssbp4Q3U4B1 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC9.66□□□□□ -0.86
Ssbp4Q3U4B1 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC9.66□□□□□ -0.86
Ssbp4Q3U4B1 Gm17825-201ENSMUST00000206836 794 ntBASIC9.66□□□□□ -0.86
Ssbp4Q3U4B1 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC9.66□□□□□ -0.86
Ssbp4Q3U4B1 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC9.66□□□□□ -0.86
Ssbp4Q3U4B1 AC165154.1-201ENSMUST00000226661 340 ntBASIC9.66□□□□□ -0.86
Ssbp4Q3U4B1 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ssbp4Q3U4B1 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ssbp4Q3U4B1 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC9.66□□□□□ -0.86
Ssbp4Q3U4B1 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC9.66□□□□□ -0.86
Ssbp4Q3U4B1 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Ssbp4Q3U4B1 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ssbp4Q3U4B1 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ssbp4Q3U4B1 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC9.66□□□□□ -0.86
Ssbp4Q3U4B1 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ssbp4Q3U4B1 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Ssbp4Q3U4B1 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ssbp4Q3U4B1 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ssbp4Q3U4B1 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Ssbp4Q3U4B1 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Ssbp4Q3U4B1 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ssbp4Q3U4B1 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ssbp4Q3U4B1 Gm43051-201ENSMUST00000201096 2678 ntBASIC9.66□□□□□ -0.86
Ssbp4Q3U4B1 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ssbp4Q3U4B1 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC9.66□□□□□ -0.86
Ssbp4Q3U4B1 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ssbp4Q3U4B1 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC9.66□□□□□ -0.86
Ssbp4Q3U4B1 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Ssbp4Q3U4B1 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC9.66□□□□□ -0.86
Ssbp4Q3U4B1 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC9.66□□□□□ -0.86
Ssbp4Q3U4B1 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Ssbp4Q3U4B1 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Ssbp4Q3U4B1 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC9.65□□□□□ -0.86
Ssbp4Q3U4B1 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Ssbp4Q3U4B1 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Ssbp4Q3U4B1 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Ssbp4Q3U4B1 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms