Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Trim63Q38HM4 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trim63Q38HM4 Lhfpl2-201ENSMUST00000054274 4348 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trim63Q38HM4 Rp1l1-201ENSMUST00000058229 6684 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trim63Q38HM4 Dlgap4-206ENSMUST00000109568 3256 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Trim63Q38HM4 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trim63Q38HM4 Prdm16-204ENSMUST00000105636 8426 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trim63Q38HM4 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trim63Q38HM4 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Trim63Q38HM4 Gm5303-201ENSMUST00000117943 1252 ntBASIC9.37□□□□□ -0.91
Trim63Q38HM4 Gm7820-201ENSMUST00000121012 1052 ntBASIC9.37□□□□□ -0.91
Trim63Q38HM4 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC9.37□□□□□ -0.91
Trim63Q38HM4 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trim63Q38HM4 Gm26464-201ENSMUST00000157094 305 ntBASIC9.37□□□□□ -0.91
Trim63Q38HM4 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC9.37□□□□□ -0.91
Trim63Q38HM4 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC9.37□□□□□ -0.91
Trim63Q38HM4 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Trim63Q38HM4 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC9.37□□□□□ -0.91
Trim63Q38HM4 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC9.37□□□□□ -0.91
Trim63Q38HM4 Gm45612-201ENSMUST00000211320 160 ntBASIC9.37□□□□□ -0.91
Trim63Q38HM4 Gm17795-201ENSMUST00000214505 757 ntBASIC9.37□□□□□ -0.91
Trim63Q38HM4 4930568E12Rik-202ENSMUST00000216694 781 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Trim63Q38HM4 Gm5628-201ENSMUST00000222318 1049 ntBASIC9.37□□□□□ -0.91
Trim63Q38HM4 Psmb5-202ENSMUST00000227257 622 ntBASIC9.37□□□□□ -0.91
Trim63Q38HM4 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trim63Q38HM4 Acad10-202ENSMUST00000111770 3626 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trim63Q38HM4 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trim63Q38HM4 Plekha2-201ENSMUST00000064883 5176 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trim63Q38HM4 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Trim63Q38HM4 Cyp4x1-202ENSMUST00000106545 4187 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trim63Q38HM4 Ptbp3-201ENSMUST00000030076 6855 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trim63Q38HM4 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC9.37□□□□□ -0.91
Trim63Q38HM4 Lin54-209ENSMUST00000152387 2760 ntTSL 5 BASIC9.37□□□□□ -0.91
Trim63Q38HM4 Ilf3-213ENSMUST00000216892 3684 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trim63Q38HM4 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trim63Q38HM4 Itgax-201ENSMUST00000033053 4046 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trim63Q38HM4 Gm18806-201ENSMUST00000207607 1775 ntBASIC9.37□□□□□ -0.91
Trim63Q38HM4 Klhl7-202ENSMUST00000163409 2857 ntTSL 2 BASIC9.37□□□□□ -0.91
Trim63Q38HM4 Ilf3-204ENSMUST00000213603 3430 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Trim63Q38HM4 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trim63Q38HM4 Dgkeos-204ENSMUST00000178493 1902 ntTSL 5 BASIC9.37□□□□□ -0.91
Trim63Q38HM4 Gm9755-201ENSMUST00000032981 1356 ntBASIC9.37□□□□□ -0.91
Trim63Q38HM4 Qars-201ENSMUST00000006838 2800 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trim63Q38HM4 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trim63Q38HM4 Nbr1-203ENSMUST00000103099 4789 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trim63Q38HM4 Irf4-202ENSMUST00000110307 4761 ntAPPRIS ALT1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trim63Q38HM4 Irf4-201ENSMUST00000021784 4764 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trim63Q38HM4 Cep83os-201ENSMUST00000181906 6566 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Trim63Q38HM4 Htr2c-201ENSMUST00000036303 4747 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trim63Q38HM4 Tec-203ENSMUST00000113594 2580 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trim63Q38HM4 Gpr68-202ENSMUST00000110065 2900 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trim63Q38HM4 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trim63Q38HM4 Gin1-203ENSMUST00000112844 2046 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trim63Q38HM4 Ubn2-205ENSMUST00000160583 14644 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trim63Q38HM4 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Trim63Q38HM4 Serpina3g-201ENSMUST00000043315 1803 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trim63Q38HM4 Acer2-202ENSMUST00000084433 4060 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Trim63Q38HM4 Akap6-202ENSMUST00000219786 4564 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trim63Q38HM4 Cdkn1b-202ENSMUST00000067327 4552 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trim63Q38HM4 Sh3tc1-207ENSMUST00000201511 4246 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trim63Q38HM4 Vmn2r-ps97-201ENSMUST00000222427 1970 ntBASIC9.36□□□□□ -0.91
Trim63Q38HM4 AC183268.1-201ENSMUST00000215753 2837 ntBASIC9.36□□□□□ -0.91
Trim63Q38HM4 Doxl2-203ENSMUST00000184917 2468 ntAPPRIS P1 TSL 3 BASIC9.36□□□□□ -0.91
Trim63Q38HM4 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trim63Q38HM4 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC9.36□□□□□ -0.91
Trim63Q38HM4 Gm11700-201ENSMUST00000119409 403 ntBASIC9.36□□□□□ -0.91
Trim63Q38HM4 Gm14704-201ENSMUST00000120300 874 ntBASIC9.36□□□□□ -0.91
Trim63Q38HM4 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Trim63Q38HM4 Gm14616-201ENSMUST00000131690 314 ntTSL 3 BASIC9.36□□□□□ -0.91
Trim63Q38HM4 2410003L11Rik-202ENSMUST00000145262 642 ntTSL 3 BASIC9.36□□□□□ -0.91
Trim63Q38HM4 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Trim63Q38HM4 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC9.36□□□□□ -0.91
Trim63Q38HM4 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC9.36□□□□□ -0.91
Trim63Q38HM4 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC9.36□□□□□ -0.91
Trim63Q38HM4 Mir3113-201ENSMUST00000175478 76 ntBASIC9.36□□□□□ -0.91
Trim63Q38HM4 Gm9022-201ENSMUST00000182482 992 ntBASIC9.36□□□□□ -0.91
Trim63Q38HM4 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC9.36□□□□□ -0.91
Trim63Q38HM4 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC9.36□□□□□ -0.91
Trim63Q38HM4 AC166051.1-201ENSMUST00000214313 210 ntBASIC9.36□□□□□ -0.91
Trim63Q38HM4 AC122305.2-201ENSMUST00000215148 834 ntBASIC9.36□□□□□ -0.91
Trim63Q38HM4 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trim63Q38HM4 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trim63Q38HM4 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trim63Q38HM4 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trim63Q38HM4 Enthd1-201ENSMUST00000096347 2110 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trim63Q38HM4 Sfi1-218ENSMUST00000153425 3759 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Trim63Q38HM4 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trim63Q38HM4 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC9.36□□□□□ -0.91
Trim63Q38HM4 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trim63Q38HM4 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC9.36□□□□□ -0.91
Trim63Q38HM4 Ing5-201ENSMUST00000027505 4533 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trim63Q38HM4 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Trim63Q38HM4 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Trim63Q38HM4 Gm9220-201ENSMUST00000190721 2544 ntBASIC9.36□□□□□ -0.91
Trim63Q38HM4 Crispld1-201ENSMUST00000095075 4472 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trim63Q38HM4 Myh4-202ENSMUST00000170942 5912 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trim63Q38HM4 Gm12912-201ENSMUST00000121596 1381 ntBASIC9.36□□□□□ -0.91
Trim63Q38HM4 Kpna6-202ENSMUST00000102590 5710 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trim63Q38HM4 Wdr37-212ENSMUST00000176922 3780 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Trim63Q38HM4 Nos1ap-203ENSMUST00000160466 1533 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms