Protein–RNA interactions for Protein: Q0VF58

Col19a1, Collagen alpha-1(XIX) chain, mousemouse

Predictions only

Length 1,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col19a1Q0VF58 AC107711.4-201ENSMUST00000228948 440 ntBASIC12.22□□□□□ -0.45
Col19a1Q0VF58 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col19a1Q0VF58 Olfr1417-201ENSMUST00000061235 948 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Col19a1Q0VF58 Cd300ld3-201ENSMUST00000092459 852 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col19a1Q0VF58 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col19a1Q0VF58 CT030684.3-201ENSMUST00000227308 2445 ntBASIC12.22□□□□□ -0.45
Col19a1Q0VF58 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Col19a1Q0VF58 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col19a1Q0VF58 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col19a1Q0VF58 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col19a1Q0VF58 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Col19a1Q0VF58 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Col19a1Q0VF58 Ccdc136-201ENSMUST00000096084 3826 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Col19a1Q0VF58 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Col19a1Q0VF58 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col19a1Q0VF58 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col19a1Q0VF58 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.22□□□□□ -0.45
Col19a1Q0VF58 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col19a1Q0VF58 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col19a1Q0VF58 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col19a1Q0VF58 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col19a1Q0VF58 Ap5s1-203ENSMUST00000110208 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col19a1Q0VF58 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col19a1Q0VF58 Acnat1-201ENSMUST00000095086 1499 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col19a1Q0VF58 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col19a1Q0VF58 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Col19a1Q0VF58 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col19a1Q0VF58 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col19a1Q0VF58 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col19a1Q0VF58 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col19a1Q0VF58 Itpa-201ENSMUST00000103193 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col19a1Q0VF58 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC12.21□□□□□ -0.45
Col19a1Q0VF58 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC12.21□□□□□ -0.45
Col19a1Q0VF58 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Col19a1Q0VF58 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Col19a1Q0VF58 Gm12106-201ENSMUST00000116006 1200 ntBASIC12.21□□□□□ -0.45
Col19a1Q0VF58 Gm12947-201ENSMUST00000116114 420 ntBASIC12.21□□□□□ -0.45
Col19a1Q0VF58 Tnni1-204ENSMUST00000139986 651 ntTSL 5 BASIC12.21□□□□□ -0.45
Col19a1Q0VF58 Pla2g1b-204ENSMUST00000145785 419 ntTSL 5 BASIC12.21□□□□□ -0.45
Col19a1Q0VF58 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Col19a1Q0VF58 Mir3060-201ENSMUST00000175339 83 ntBASIC12.21□□□□□ -0.45
Col19a1Q0VF58 Gm7833-201ENSMUST00000183288 990 ntBASIC12.21□□□□□ -0.45
Col19a1Q0VF58 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Col19a1Q0VF58 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC12.21□□□□□ -0.45
Col19a1Q0VF58 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC12.21□□□□□ -0.45
Col19a1Q0VF58 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC12.21□□□□□ -0.45
Col19a1Q0VF58 Gm45680-201ENSMUST00000211135 214 ntTSL 3 BASIC12.21□□□□□ -0.45
Col19a1Q0VF58 Gm4032-203ENSMUST00000211600 531 ntTSL 3 BASIC12.21□□□□□ -0.45
Col19a1Q0VF58 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC12.21□□□□□ -0.45
Col19a1Q0VF58 AC122024.3-201ENSMUST00000217719 294 ntBASIC12.21□□□□□ -0.45
Col19a1Q0VF58 Gm18515-201ENSMUST00000219755 797 ntBASIC12.21□□□□□ -0.45
Col19a1Q0VF58 Gm29689-201ENSMUST00000221076 589 ntBASIC12.21□□□□□ -0.45
Col19a1Q0VF58 AC154435.1-201ENSMUST00000223938 959 ntBASIC12.21□□□□□ -0.45
Col19a1Q0VF58 AC154433.1-201ENSMUST00000224401 1183 ntBASIC12.21□□□□□ -0.45
Col19a1Q0VF58 AC154589.2-201ENSMUST00000228847 251 ntBASIC12.21□□□□□ -0.45
Col19a1Q0VF58 Mir341-201ENSMUST00000093593 96 ntBASIC12.21□□□□□ -0.45
Col19a1Q0VF58 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col19a1Q0VF58 Gm5159-201ENSMUST00000212733 1652 ntBASIC12.21□□□□□ -0.45
Col19a1Q0VF58 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Col19a1Q0VF58 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Col19a1Q0VF58 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Col19a1Q0VF58 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Col19a1Q0VF58 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Col19a1Q0VF58 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Col19a1Q0VF58 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Col19a1Q0VF58 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Col19a1Q0VF58 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Col19a1Q0VF58 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Col19a1Q0VF58 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col19a1Q0VF58 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col19a1Q0VF58 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col19a1Q0VF58 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col19a1Q0VF58 Olfr171-202ENSMUST00000205467 1406 ntAPPRIS ALT1 TSL 2 BASIC12.2□□□□□ -0.46
Col19a1Q0VF58 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Col19a1Q0VF58 B430203G13Rik-201ENSMUST00000169657 1375 ntBASIC12.2□□□□□ -0.46
Col19a1Q0VF58 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col19a1Q0VF58 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.2□□□□□ -0.46
Col19a1Q0VF58 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.2□□□□□ -0.46
Col19a1Q0VF58 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC12.2□□□□□ -0.46
Col19a1Q0VF58 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Col19a1Q0VF58 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col19a1Q0VF58 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Col19a1Q0VF58 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Col19a1Q0VF58 6430531B16Rik-202ENSMUST00000121412 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col19a1Q0VF58 Gm14829-201ENSMUST00000121499 1138 ntBASIC12.2□□□□□ -0.46
Col19a1Q0VF58 Ndufb5-202ENSMUST00000121778 574 ntTSL 3 BASIC12.2□□□□□ -0.46
Col19a1Q0VF58 Gm12606-202ENSMUST00000129527 1184 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Col19a1Q0VF58 3010001F23Rik-201ENSMUST00000130625 876 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Col19a1Q0VF58 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Col19a1Q0VF58 Eif5a-212ENSMUST00000153652 840 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Col19a1Q0VF58 Gm17207-201ENSMUST00000168686 645 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Col19a1Q0VF58 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
Col19a1Q0VF58 Gm7445-201ENSMUST00000192115 340 ntBASIC12.2□□□□□ -0.46
Col19a1Q0VF58 Gm37319-201ENSMUST00000193500 636 ntBASIC12.2□□□□□ -0.46
Col19a1Q0VF58 Gm37688-201ENSMUST00000195195 465 ntBASIC12.2□□□□□ -0.46
Col19a1Q0VF58 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC12.2□□□□□ -0.46
Col19a1Q0VF58 Gm44044-201ENSMUST00000205178 1089 ntBASIC12.2□□□□□ -0.46
Col19a1Q0VF58 Gm45090-201ENSMUST00000208775 1148 ntBASIC12.2□□□□□ -0.46
Col19a1Q0VF58 Gm9644-201ENSMUST00000212828 1183 ntBASIC12.2□□□□□ -0.46
Col19a1Q0VF58 Thy1-205ENSMUST00000215156 460 ntTSL 5 BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms