Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC9.54□□□□□ -0.88
Tff1Q08423 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Tff1Q08423 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Tff1Q08423 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Tff1Q08423 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Tff1Q08423 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Tff1Q08423 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Tff1Q08423 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Tff1Q08423 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Tff1Q08423 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC9.53□□□□□ -0.88
Tff1Q08423 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC9.53□□□□□ -0.88
Tff1Q08423 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC9.53□□□□□ -0.88
Tff1Q08423 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Tff1Q08423 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Tff1Q08423 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Tff1Q08423 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Tff1Q08423 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Tff1Q08423 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Tff1Q08423 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Tff1Q08423 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC9.53□□□□□ -0.88
Tff1Q08423 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC9.53□□□□□ -0.88
Tff1Q08423 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Tff1Q08423 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Tff1Q08423 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Tff1Q08423 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC9.53□□□□□ -0.88
Tff1Q08423 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC9.53□□□□□ -0.88
Tff1Q08423 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Tff1Q08423 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC9.53□□□□□ -0.88
Tff1Q08423 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC9.53□□□□□ -0.88
Tff1Q08423 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
Tff1Q08423 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
Tff1Q08423 Gm19459-201ENSMUST00000176240 835 ntBASIC9.53□□□□□ -0.88
Tff1Q08423 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC9.53□□□□□ -0.88
Tff1Q08423 Gm9192-201ENSMUST00000183221 985 ntBASIC9.53□□□□□ -0.88
Tff1Q08423 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC9.53□□□□□ -0.88
Tff1Q08423 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Tff1Q08423 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC9.53□□□□□ -0.88
Tff1Q08423 Gm17812-201ENSMUST00000204935 318 ntBASIC9.53□□□□□ -0.88
Tff1Q08423 Gm45691-201ENSMUST00000206905 1120 ntBASIC9.53□□□□□ -0.88
Tff1Q08423 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC9.53□□□□□ -0.88
Tff1Q08423 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC9.53□□□□□ -0.88
Tff1Q08423 Aprt-ps-201ENSMUST00000212311 505 ntBASIC9.53□□□□□ -0.88
Tff1Q08423 Lect2-202ENSMUST00000225183 823 ntBASIC9.53□□□□□ -0.88
Tff1Q08423 AC131330.1-201ENSMUST00000227814 1015 ntBASIC9.53□□□□□ -0.88
Tff1Q08423 AC121960.1-201ENSMUST00000227982 564 ntBASIC9.53□□□□□ -0.88
Tff1Q08423 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Tff1Q08423 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Tff1Q08423 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Tff1Q08423 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC9.53□□□□□ -0.88
Tff1Q08423 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Tff1Q08423 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Tff1Q08423 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Tff1Q08423 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Tff1Q08423 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Tff1Q08423 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Tff1Q08423 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Tff1Q08423 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Tff1Q08423 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Tff1Q08423 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Tff1Q08423 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Tff1Q08423 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC9.53□□□□□ -0.88
Tff1Q08423 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Tff1Q08423 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Tff1Q08423 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.88
Tff1Q08423 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Tff1Q08423 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.88
Tff1Q08423 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC9.52□□□□□ -0.88
Tff1Q08423 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
Tff1Q08423 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Tff1Q08423 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC9.52□□□□□ -0.88
Tff1Q08423 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Tff1Q08423 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC9.52□□□□□ -0.88
Tff1Q08423 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.88
Tff1Q08423 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC9.52□□□□□ -0.89
Tff1Q08423 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Tff1Q08423 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Tff1Q08423 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Tff1Q08423 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Tff1Q08423 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Tff1Q08423 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Tff1Q08423 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Tff1Q08423 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Tff1Q08423 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Tff1Q08423 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Tff1Q08423 Gm13408-201ENSMUST00000119822 798 ntBASIC9.52□□□□□ -0.89
Tff1Q08423 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Tff1Q08423 Gm13935-201ENSMUST00000121859 798 ntBASIC9.52□□□□□ -0.89
Tff1Q08423 Gm6963-201ENSMUST00000147879 379 ntBASIC9.52□□□□□ -0.89
Tff1Q08423 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Tff1Q08423 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC9.52□□□□□ -0.89
Tff1Q08423 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Tff1Q08423 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Tff1Q08423 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Tff1Q08423 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Tff1Q08423 Gm6114-201ENSMUST00000182472 968 ntBASIC9.52□□□□□ -0.89
Tff1Q08423 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Tff1Q08423 AC140293.1-201ENSMUST00000225626 1247 ntBASIC9.52□□□□□ -0.89
Tff1Q08423 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Tff1Q08423 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Tff1Q08423 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms