Protein–RNA interactions for Protein: P70196

Traf6, TNF receptor-associated factor 6, mousemouse

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf6P70196 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Traf6P70196 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Traf6P70196 Gm45657-201ENSMUST00000211318 1349 ntBASIC11.35□□□□□ -0.59
Traf6P70196 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC11.35□□□□□ -0.59
Traf6P70196 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC11.35□□□□□ -0.59
Traf6P70196 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Traf6P70196 Gm7841-201ENSMUST00000122108 1629 ntBASIC11.35□□□□□ -0.59
Traf6P70196 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Traf6P70196 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Traf6P70196 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Traf6P70196 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Traf6P70196 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Traf6P70196 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Traf6P70196 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC11.35□□□□□ -0.59
Traf6P70196 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Traf6P70196 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Traf6P70196 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Traf6P70196 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Traf6P70196 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Traf6P70196 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Traf6P70196 Gm24541-201ENSMUST00000103871 96 ntBASIC11.35□□□□□ -0.59
Traf6P70196 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC11.35□□□□□ -0.59
Traf6P70196 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC11.35□□□□□ -0.59
Traf6P70196 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC11.35□□□□□ -0.59
Traf6P70196 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Traf6P70196 A330048O09Rik-201ENSMUST00000180777 672 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Traf6P70196 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC11.35□□□□□ -0.59
Traf6P70196 Gm28937-201ENSMUST00000185413 695 ntBASIC11.35□□□□□ -0.59
Traf6P70196 Gm29400-201ENSMUST00000187208 695 ntBASIC11.35□□□□□ -0.59
Traf6P70196 Gm29199-201ENSMUST00000187766 775 ntBASIC11.35□□□□□ -0.59
Traf6P70196 Gm28662-201ENSMUST00000188446 695 ntBASIC11.35□□□□□ -0.59
Traf6P70196 Gm28251-201ENSMUST00000188835 695 ntBASIC11.35□□□□□ -0.59
Traf6P70196 Gm37666-201ENSMUST00000194110 866 ntBASIC11.35□□□□□ -0.59
Traf6P70196 Gm37318-201ENSMUST00000194325 695 ntBASIC11.35□□□□□ -0.59
Traf6P70196 Gm38017-201ENSMUST00000194768 695 ntBASIC11.35□□□□□ -0.59
Traf6P70196 Gm37287-201ENSMUST00000195449 695 ntBASIC11.35□□□□□ -0.59
Traf6P70196 Gm37793-201ENSMUST00000195548 695 ntBASIC11.35□□□□□ -0.59
Traf6P70196 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC11.35□□□□□ -0.59
Traf6P70196 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Traf6P70196 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC11.35□□□□□ -0.59
Traf6P70196 Gm9520-201ENSMUST00000209460 1253 ntBASIC11.35□□□□□ -0.59
Traf6P70196 Gm21027-201ENSMUST00000219300 1236 ntBASIC11.35□□□□□ -0.59
Traf6P70196 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Traf6P70196 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC11.35□□□□□ -0.59
Traf6P70196 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC11.35□□□□□ -0.59
Traf6P70196 AC173482.3-201ENSMUST00000225492 1212 ntBASIC11.35□□□□□ -0.59
Traf6P70196 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Traf6P70196 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Traf6P70196 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Traf6P70196 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Traf6P70196 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Traf6P70196 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Traf6P70196 Gm7993-201ENSMUST00000200970 1384 ntBASIC11.35□□□□□ -0.59
Traf6P70196 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Traf6P70196 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Traf6P70196 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Traf6P70196 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Traf6P70196 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC11.35□□□□□ -0.59
Traf6P70196 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Traf6P70196 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Traf6P70196 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Traf6P70196 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC11.35□□□□□ -0.59
Traf6P70196 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Traf6P70196 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Traf6P70196 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC11.35□□□□□ -0.59
Traf6P70196 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Traf6P70196 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Traf6P70196 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Traf6P70196 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Traf6P70196 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Traf6P70196 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Traf6P70196 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Traf6P70196 Gm43937-201ENSMUST00000204640 3122 ntBASIC11.34□□□□□ -0.59
Traf6P70196 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC11.34□□□□□ -0.59
Traf6P70196 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC11.34□□□□□ -0.59
Traf6P70196 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Traf6P70196 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Traf6P70196 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Traf6P70196 AC091458.1-201ENSMUST00000220902 1361 ntBASIC11.34□□□□□ -0.59
Traf6P70196 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Traf6P70196 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Traf6P70196 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
Traf6P70196 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Traf6P70196 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Traf6P70196 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC11.34□□□□□ -0.59
Traf6P70196 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Traf6P70196 Gm38117-201ENSMUST00000194653 939 ntBASIC11.34□□□□□ -0.59
Traf6P70196 Gm44415-201ENSMUST00000204151 2112 ntBASIC11.34□□□□□ -0.59
Traf6P70196 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC11.34□□□□□ -0.59
Traf6P70196 Gm9797-202ENSMUST00000218003 294 ntBASIC11.34□□□□□ -0.59
Traf6P70196 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Traf6P70196 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Traf6P70196 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Traf6P70196 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Traf6P70196 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Traf6P70196 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Traf6P70196 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Traf6P70196 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Traf6P70196 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Traf6P70196 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms