Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC8.13□□□□□ -1.11
Rpl39P62892 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC8.13□□□□□ -1.11
Rpl39P62892 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC8.13□□□□□ -1.11
Rpl39P62892 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC8.13□□□□□ -1.11
Rpl39P62892 Gm18187-201ENSMUST00000196476 984 ntBASIC8.13□□□□□ -1.11
Rpl39P62892 Gm43118-201ENSMUST00000199149 775 ntBASIC8.13□□□□□ -1.11
Rpl39P62892 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC8.13□□□□□ -1.11
Rpl39P62892 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC8.13□□□□□ -1.11
Rpl39P62892 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC8.13□□□□□ -1.11
Rpl39P62892 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC8.13□□□□□ -1.11
Rpl39P62892 CT009713.10-202ENSMUST00000225734 696 ntBASIC8.13□□□□□ -1.11
Rpl39P62892 AC113031.8-201ENSMUST00000227856 631 ntBASIC8.13□□□□□ -1.11
Rpl39P62892 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Rpl39P62892 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Rpl39P62892 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Rpl39P62892 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Rpl39P62892 Mgat5-201ENSMUST00000038361 8436 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Rpl39P62892 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC8.13□□□□□ -1.11
Rpl39P62892 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Rpl39P62892 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Rpl39P62892 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Rpl39P62892 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Rpl39P62892 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Rpl39P62892 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Rpl39P62892 Hpcal4-201ENSMUST00000059667 4931 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Rpl39P62892 Spata33-207ENSMUST00000212760 4074 ntBASIC8.13□□□□□ -1.11
Rpl39P62892 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Rpl39P62892 Pak7-201ENSMUST00000035264 4848 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Rpl39P62892 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Rpl39P62892 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Rpl39P62892 Myo9a-203ENSMUST00000128341 11985 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Rpl39P62892 Tnk2-204ENSMUST00000115123 4225 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Rpl39P62892 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Rpl39P62892 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Rpl39P62892 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Rpl39P62892 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Rpl39P62892 Sgk3-203ENSMUST00000168907 3779 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Rpl39P62892 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Rpl39P62892 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Rpl39P62892 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Rpl39P62892 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Rpl39P62892 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Rpl39P62892 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
Rpl39P62892 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Rpl39P62892 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Rpl39P62892 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Rpl39P62892 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Rpl39P62892 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
Rpl39P62892 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Rpl39P62892 AC173482.6-201ENSMUST00000225889 1741 ntBASIC8.12□□□□□ -1.11
Rpl39P62892 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Rpl39P62892 Gm14150-201ENSMUST00000122404 1354 ntBASIC8.12□□□□□ -1.11
Rpl39P62892 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC8.12□□□□□ -1.11
Rpl39P62892 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC8.12□□□□□ -1.11
Rpl39P62892 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Rpl39P62892 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Rpl39P62892 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Rpl39P62892 Iqce-201ENSMUST00000041783 6037 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
Rpl39P62892 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Rpl39P62892 Msh3-202ENSMUST00000185852 3946 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
Rpl39P62892 Ltbp1-203ENSMUST00000112516 5140 ntAPPRIS P3 TSL 5 BASIC8.12□□□□□ -1.11
Rpl39P62892 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Rpl39P62892 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Rpl39P62892 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Rpl39P62892 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Rpl39P62892 Gm12390-201ENSMUST00000117897 397 ntBASIC8.12□□□□□ -1.11
Rpl39P62892 Gm12463-201ENSMUST00000118271 849 ntBASIC8.12□□□□□ -1.11
Rpl39P62892 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC8.12□□□□□ -1.11
Rpl39P62892 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC8.12□□□□□ -1.11
Rpl39P62892 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC8.12□□□□□ -1.11
Rpl39P62892 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC8.12□□□□□ -1.11
Rpl39P62892 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC8.12□□□□□ -1.11
Rpl39P62892 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC8.12□□□□□ -1.11
Rpl39P62892 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
Rpl39P62892 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC8.12□□□□□ -1.11
Rpl39P62892 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Rpl39P62892 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC8.12□□□□□ -1.11
Rpl39P62892 AC159896.2-201ENSMUST00000214753 269 ntBASIC8.12□□□□□ -1.11
Rpl39P62892 CT571245.2-201ENSMUST00000218421 305 ntBASIC8.12□□□□□ -1.11
Rpl39P62892 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC8.12□□□□□ -1.11
Rpl39P62892 Gm18065-201ENSMUST00000221395 526 ntBASIC8.12□□□□□ -1.11
Rpl39P62892 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC8.12□□□□□ -1.11
Rpl39P62892 AC166344.1-202ENSMUST00000224139 234 ntBASIC8.12□□□□□ -1.11
Rpl39P62892 AC154462.2-201ENSMUST00000227519 370 ntBASIC8.12□□□□□ -1.11
Rpl39P62892 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Rpl39P62892 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Rpl39P62892 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Rpl39P62892 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
Rpl39P62892 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Rpl39P62892 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Rpl39P62892 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Rpl39P62892 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC8.12□□□□□ -1.11
Rpl39P62892 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Rpl39P62892 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
Rpl39P62892 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Rpl39P62892 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Rpl39P62892 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Rpl39P62892 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Rpl39P62892 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC8.12□□□□□ -1.11
Rpl39P62892 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms