Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC10.35□□□□□ -0.75
Lsm3P62311 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Lsm3P62311 Pigq-218ENSMUST00000208043 2987 ntAPPRIS P3 TSL 5 BASIC10.35□□□□□ -0.75
Lsm3P62311 Gm20715-201ENSMUST00000054781 4460 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
Lsm3P62311 Tbc1d31-201ENSMUST00000022992 3311 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Lsm3P62311 Hhip-201ENSMUST00000079038 9074 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Lsm3P62311 Shank2-201ENSMUST00000097929 4418 ntTSL 5 BASIC10.35□□□□□ -0.75
Lsm3P62311 Mid1-214ENSMUST00000163810 3689 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Lsm3P62311 Gm44103-201ENSMUST00000204364 3662 ntBASIC10.35□□□□□ -0.75
Lsm3P62311 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Lsm3P62311 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Lsm3P62311 Cyp2b10-202ENSMUST00000072438 1916 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Lsm3P62311 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Lsm3P62311 Bicd1-203ENSMUST00000111513 4049 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Lsm3P62311 Hrh1-201ENSMUST00000088987 3782 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Lsm3P62311 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Lsm3P62311 Mkl1-204ENSMUST00000134469 4392 ntTSL 5 BASIC10.35□□□□□ -0.75
Lsm3P62311 Top1-201ENSMUST00000109468 3856 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Lsm3P62311 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Lsm3P62311 Adgrl3-215ENSMUST00000120673 5178 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Lsm3P62311 D2hgdh-201ENSMUST00000097633 3232 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Lsm3P62311 Gm7722-201ENSMUST00000120646 741 ntBASIC10.35□□□□□ -0.75
Lsm3P62311 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC10.35□□□□□ -0.75
Lsm3P62311 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Lsm3P62311 Gm22331-201ENSMUST00000158066 136 ntBASIC10.35□□□□□ -0.75
Lsm3P62311 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC10.35□□□□□ -0.75
Lsm3P62311 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC10.35□□□□□ -0.75
Lsm3P62311 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC10.35□□□□□ -0.75
Lsm3P62311 Gm4271-201ENSMUST00000174444 973 ntBASIC10.35□□□□□ -0.75
Lsm3P62311 Mir6956-201ENSMUST00000183598 62 ntBASIC10.35□□□□□ -0.75
Lsm3P62311 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC10.35□□□□□ -0.75
Lsm3P62311 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Lsm3P62311 Gm28911-201ENSMUST00000188837 117 ntBASIC10.35□□□□□ -0.75
Lsm3P62311 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Lsm3P62311 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Lsm3P62311 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Lsm3P62311 AC132104.2-201ENSMUST00000215011 266 ntBASIC10.35□□□□□ -0.75
Lsm3P62311 Gm7293-201ENSMUST00000216682 1007 ntBASIC10.35□□□□□ -0.75
Lsm3P62311 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Lsm3P62311 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC10.35□□□□□ -0.75
Lsm3P62311 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Lsm3P62311 Pld5-203ENSMUST00000111167 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Lsm3P62311 Fyco1-202ENSMUST00000167595 7692 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Lsm3P62311 Srcap-201ENSMUST00000066582 4545 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Lsm3P62311 Trim17-201ENSMUST00000047697 3664 ntTSL 2 BASIC10.35□□□□□ -0.75
Lsm3P62311 Bcl2-202ENSMUST00000189999 2841 ntBASIC10.35□□□□□ -0.75
Lsm3P62311 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Lsm3P62311 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC10.35□□□□□ -0.75
Lsm3P62311 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Lsm3P62311 Gne-201ENSMUST00000030201 5384 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Lsm3P62311 Anapc15-213ENSMUST00000178851 2797 ntTSL 2 BASIC10.35□□□□□ -0.75
Lsm3P62311 Gm43517-201ENSMUST00000110746 3904 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
Lsm3P62311 Sema4g-203ENSMUST00000179305 4290 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Lsm3P62311 Rnft2-201ENSMUST00000117177 4381 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Lsm3P62311 Gm13920-201ENSMUST00000146134 1663 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Lsm3P62311 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Lsm3P62311 Dusp16-202ENSMUST00000129433 3993 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Lsm3P62311 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Lsm3P62311 Tnfrsf9-205ENSMUST00000116257 2115 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Lsm3P62311 Txndc16-203ENSMUST00000123879 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Lsm3P62311 Bcl9-201ENSMUST00000046521 6102 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Lsm3P62311 Robo4-203ENSMUST00000115048 3392 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Lsm3P62311 Hsdl1-204ENSMUST00000212517 2215 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Lsm3P62311 Spata31d1a-201ENSMUST00000066510 4261 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
Lsm3P62311 Ndufab1-201ENSMUST00000033157 3479 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Lsm3P62311 Dusp11-201ENSMUST00000032071 6435 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Lsm3P62311 Dnajc10-201ENSMUST00000028392 4042 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Lsm3P62311 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Lsm3P62311 Umad1-201ENSMUST00000159168 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Lsm3P62311 Slc1a2-204ENSMUST00000111213 2093 ntTSL 5 BASIC10.34□□□□□ -0.75
Lsm3P62311 Abcb8-203ENSMUST00000115077 3074 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Lsm3P62311 AC164161.2-201ENSMUST00000217446 1730 ntTSL 5 BASIC10.34□□□□□ -0.75
Lsm3P62311 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Lsm3P62311 Tor4a-201ENSMUST00000081869 3255 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Lsm3P62311 Mir692-1-201ENSMUST00000102263 109 ntBASIC10.34□□□□□ -0.75
Lsm3P62311 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC10.34□□□□□ -0.75
Lsm3P62311 Gm12463-201ENSMUST00000118271 849 ntBASIC10.34□□□□□ -0.75
Lsm3P62311 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC10.34□□□□□ -0.75
Lsm3P62311 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC10.34□□□□□ -0.75
Lsm3P62311 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC10.34□□□□□ -0.75
Lsm3P62311 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC10.34□□□□□ -0.75
Lsm3P62311 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC10.34□□□□□ -0.75
Lsm3P62311 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC10.34□□□□□ -0.75
Lsm3P62311 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Lsm3P62311 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Lsm3P62311 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC10.34□□□□□ -0.75
Lsm3P62311 AC102569.1-201ENSMUST00000221563 685 ntBASIC10.34□□□□□ -0.75
Lsm3P62311 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC10.34□□□□□ -0.75
Lsm3P62311 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Lsm3P62311 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Lsm3P62311 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Lsm3P62311 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Lsm3P62311 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Lsm3P62311 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Lsm3P62311 Mdm1-203ENSMUST00000164077 2922 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Lsm3P62311 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC10.34□□□□□ -0.75
Lsm3P62311 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC10.34□□□□□ -0.75
Lsm3P62311 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Lsm3P62311 Cbfa2t3-203ENSMUST00000127984 7645 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Lsm3P62311 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms