Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC12.76□□□□□ -0.37
Tpm1P58771 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.76□□□□□ -0.37
Tpm1P58771 Morn2-202ENSMUST00000227729 656 ntBASIC12.76□□□□□ -0.37
Tpm1P58771 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tpm1P58771 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tpm1P58771 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Tpm1P58771 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Tpm1P58771 Gm10152-201ENSMUST00000193475 1344 ntBASIC12.76□□□□□ -0.37
Tpm1P58771 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tpm1P58771 Smad9-201ENSMUST00000029371 5368 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tpm1P58771 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Tpm1P58771 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tpm1P58771 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tpm1P58771 Gm15983-201ENSMUST00000140000 4814 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Tpm1P58771 Col4a6-201ENSMUST00000101205 6648 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tpm1P58771 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Tpm1P58771 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Tpm1P58771 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tpm1P58771 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Tpm1P58771 Asap1-202ENSMUST00000110114 4409 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Tpm1P58771 Mical2-202ENSMUST00000050149 6669 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tpm1P58771 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tpm1P58771 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Tpm1P58771 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Tpm1P58771 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tpm1P58771 C4b-201ENSMUST00000069507 5379 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tpm1P58771 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
Tpm1P58771 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Tpm1P58771 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tpm1P58771 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tpm1P58771 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tpm1P58771 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Tpm1P58771 Unkl-202ENSMUST00000039734 4779 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Tpm1P58771 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC12.75□□□□□ -0.37
Tpm1P58771 Tor1aip2-201ENSMUST00000060404 5135 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tpm1P58771 Gm25214-201ENSMUST00000104573 129 ntBASIC12.75□□□□□ -0.37
Tpm1P58771 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tpm1P58771 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
Tpm1P58771 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tpm1P58771 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Tpm1P58771 Gm15824-201ENSMUST00000119516 955 ntBASIC12.75□□□□□ -0.37
Tpm1P58771 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Tpm1P58771 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tpm1P58771 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Tpm1P58771 Gm37489-201ENSMUST00000191883 159 ntBASIC12.75□□□□□ -0.37
Tpm1P58771 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.75□□□□□ -0.37
Tpm1P58771 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.75□□□□□ -0.37
Tpm1P58771 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Tpm1P58771 AC165351.1-201ENSMUST00000219078 2020 ntBASIC12.75□□□□□ -0.37
Tpm1P58771 Gm18065-201ENSMUST00000221395 526 ntBASIC12.75□□□□□ -0.37
Tpm1P58771 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tpm1P58771 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tpm1P58771 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tpm1P58771 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tpm1P58771 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Tpm1P58771 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tpm1P58771 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Tpm1P58771 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tpm1P58771 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC12.75□□□□□ -0.37
Tpm1P58771 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tpm1P58771 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tpm1P58771 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tpm1P58771 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tpm1P58771 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Tpm1P58771 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tpm1P58771 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tpm1P58771 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tpm1P58771 Gm14150-201ENSMUST00000122404 1354 ntBASIC12.74□□□□□ -0.37
Tpm1P58771 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.74□□□□□ -0.37
Tpm1P58771 Gm6203-201ENSMUST00000209575 1342 ntBASIC12.74□□□□□ -0.37
Tpm1P58771 Gm22018-201ENSMUST00000104357 131 ntBASIC12.74□□□□□ -0.37
Tpm1P58771 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tpm1P58771 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tpm1P58771 Gm11660-201ENSMUST00000120955 412 ntBASIC12.74□□□□□ -0.37
Tpm1P58771 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Tpm1P58771 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Tpm1P58771 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tpm1P58771 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC12.74□□□□□ -0.37
Tpm1P58771 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Tpm1P58771 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.74□□□□□ -0.37
Tpm1P58771 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.74□□□□□ -0.37
Tpm1P58771 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC12.74□□□□□ -0.37
Tpm1P58771 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC12.74□□□□□ -0.37
Tpm1P58771 Gm43966-201ENSMUST00000203301 612 ntBASIC12.74□□□□□ -0.37
Tpm1P58771 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Tpm1P58771 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Tpm1P58771 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tpm1P58771 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Tpm1P58771 Adgrl3-215ENSMUST00000120673 5178 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Tpm1P58771 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Tpm1P58771 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tpm1P58771 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Tpm1P58771 Ocstamp-201ENSMUST00000029213 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tpm1P58771 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Tpm1P58771 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tpm1P58771 Slc7a1-201ENSMUST00000048116 7179 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tpm1P58771 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Tpm1P58771 Slc45a4-207ENSMUST00000151288 7509 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tpm1P58771 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tpm1P58771 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms