Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Ighv5-7-201ENSMUST00000192302 244 ntBASIC12.91□□□□□ -0.34
Rrp1P56183 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rrp1P56183 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rrp1P56183 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Rrp1P56183 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Rrp1P56183 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rrp1P56183 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Rrp1P56183 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC12.91□□□□□ -0.34
Rrp1P56183 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rrp1P56183 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Rrp1P56183 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rrp1P56183 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rrp1P56183 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rrp1P56183 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rrp1P56183 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC12.91□□□□□ -0.34
Rrp1P56183 Gm18798-201ENSMUST00000187264 1700 ntBASIC12.91□□□□□ -0.34
Rrp1P56183 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC12.91□□□□□ -0.34
Rrp1P56183 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rrp1P56183 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC12.9□□□□□ -0.34
Rrp1P56183 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rrp1P56183 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Rrp1P56183 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
Rrp1P56183 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Rrp1P56183 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rrp1P56183 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rrp1P56183 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rrp1P56183 AC169511.2-201ENSMUST00000226674 2063 ntBASIC12.9□□□□□ -0.34
Rrp1P56183 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC12.9□□□□□ -0.34
Rrp1P56183 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rrp1P56183 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rrp1P56183 Gm8752-201ENSMUST00000173427 1694 ntBASIC12.9□□□□□ -0.34
Rrp1P56183 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Rrp1P56183 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Rrp1P56183 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Rrp1P56183 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rrp1P56183 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Rrp1P56183 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
Rrp1P56183 Gm11783-201ENSMUST00000119549 885 ntBASIC12.9□□□□□ -0.34
Rrp1P56183 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC12.9□□□□□ -0.34
Rrp1P56183 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC12.9□□□□□ -0.34
Rrp1P56183 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Rrp1P56183 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Rrp1P56183 Gm26047-201ENSMUST00000157308 113 ntBASIC12.9□□□□□ -0.34
Rrp1P56183 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rrp1P56183 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC12.9□□□□□ -0.34
Rrp1P56183 Gm26047-202ENSMUST00000198840 115 ntBASIC12.9□□□□□ -0.34
Rrp1P56183 Gm18539-201ENSMUST00000204745 1090 ntBASIC12.9□□□□□ -0.34
Rrp1P56183 AC156501.1-201ENSMUST00000228219 270 ntBASIC12.9□□□□□ -0.34
Rrp1P56183 AC135114.1-201ENSMUST00000228682 270 ntBASIC12.9□□□□□ -0.34
Rrp1P56183 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rrp1P56183 Rassf8-202ENSMUST00000058538 1131 ntBASIC12.9□□□□□ -0.34
Rrp1P56183 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rrp1P56183 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rrp1P56183 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Rrp1P56183 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC12.9□□□□□ -0.34
Rrp1P56183 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Rrp1P56183 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Rrp1P56183 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Rrp1P56183 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rrp1P56183 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rrp1P56183 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rrp1P56183 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rrp1P56183 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Rrp1P56183 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Rrp1P56183 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rrp1P56183 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rrp1P56183 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC12.89□□□□□ -0.35
Rrp1P56183 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Rrp1P56183 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Rrp1P56183 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rrp1P56183 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rrp1P56183 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Rrp1P56183 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rrp1P56183 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Rrp1P56183 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rrp1P56183 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rrp1P56183 Gm38271-201ENSMUST00000192296 1603 ntBASIC12.89□□□□□ -0.35
Rrp1P56183 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC12.89□□□□□ -0.35
Rrp1P56183 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rrp1P56183 AC127597.1-201ENSMUST00000225697 5711 ntBASIC12.89□□□□□ -0.35
Rrp1P56183 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Rrp1P56183 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rrp1P56183 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC12.89□□□□□ -0.35
Rrp1P56183 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Rrp1P56183 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC12.89□□□□□ -0.35
Rrp1P56183 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rrp1P56183 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rrp1P56183 Gm4819-201ENSMUST00000182170 1009 ntBASIC12.89□□□□□ -0.35
Rrp1P56183 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Rrp1P56183 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Rrp1P56183 Gm33366-201ENSMUST00000195583 3827 ntBASIC12.89□□□□□ -0.35
Rrp1P56183 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC12.89□□□□□ -0.35
Rrp1P56183 AY036118-201ENSMUST00000200021 923 ntBASIC12.89□□□□□ -0.35
Rrp1P56183 Gm9176-201ENSMUST00000219955 1120 ntBASIC12.89□□□□□ -0.35
Rrp1P56183 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rrp1P56183 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rrp1P56183 Gm4978-201ENSMUST00000071565 801 ntBASIC12.89□□□□□ -0.35
Rrp1P56183 AC207128.2-201ENSMUST00000223708 1924 ntBASIC12.89□□□□□ -0.35
Rrp1P56183 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Rrp1P56183 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms