Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC11.46□□□□□ -0.57
Fdft1P53798 AC107638.1-201ENSMUST00000213690 1061 ntBASIC11.46□□□□□ -0.57
Fdft1P53798 Gm18730-201ENSMUST00000218038 343 ntBASIC11.46□□□□□ -0.57
Fdft1P53798 CT485787.1-201ENSMUST00000225617 968 ntBASIC11.46□□□□□ -0.57
Fdft1P53798 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Fdft1P53798 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Fdft1P53798 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC11.46□□□□□ -0.57
Fdft1P53798 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Fdft1P53798 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Fdft1P53798 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Fdft1P53798 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Fdft1P53798 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Fdft1P53798 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Fdft1P53798 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Fdft1P53798 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Fdft1P53798 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.58
Fdft1P53798 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Fdft1P53798 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Fdft1P53798 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Fdft1P53798 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC11.45□□□□□ -0.58
Fdft1P53798 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Fdft1P53798 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC11.45□□□□□ -0.58
Fdft1P53798 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Fdft1P53798 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Fdft1P53798 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Fdft1P53798 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Fdft1P53798 Gm1840-201ENSMUST00000051687 1432 ntBASIC11.45□□□□□ -0.58
Fdft1P53798 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Fdft1P53798 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Fdft1P53798 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Fdft1P53798 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
Fdft1P53798 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Fdft1P53798 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Fdft1P53798 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Fdft1P53798 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Fdft1P53798 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC11.45□□□□□ -0.58
Fdft1P53798 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Fdft1P53798 Gm15808-201ENSMUST00000119046 604 ntBASIC11.45□□□□□ -0.58
Fdft1P53798 Cd63-ps-202ENSMUST00000154992 717 ntBASIC11.45□□□□□ -0.58
Fdft1P53798 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Fdft1P53798 Gm27530-201ENSMUST00000184096 98 ntBASIC11.45□□□□□ -0.58
Fdft1P53798 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Fdft1P53798 Gm4857-201ENSMUST00000192718 785 ntBASIC11.45□□□□□ -0.58
Fdft1P53798 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Fdft1P53798 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
Fdft1P53798 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC11.45□□□□□ -0.58
Fdft1P53798 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Fdft1P53798 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Fdft1P53798 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Fdft1P53798 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Fdft1P53798 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Fdft1P53798 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Fdft1P53798 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC11.45□□□□□ -0.58
Fdft1P53798 Gm37954-201ENSMUST00000195400 2071 ntBASIC11.45□□□□□ -0.58
Fdft1P53798 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Fdft1P53798 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Fdft1P53798 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Fdft1P53798 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Fdft1P53798 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Fdft1P53798 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC11.45□□□□□ -0.58
Fdft1P53798 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Fdft1P53798 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Fdft1P53798 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC11.44□□□□□ -0.58
Fdft1P53798 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Fdft1P53798 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Fdft1P53798 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Fdft1P53798 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Fdft1P53798 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC11.44□□□□□ -0.58
Fdft1P53798 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Fdft1P53798 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC11.44□□□□□ -0.58
Fdft1P53798 Gm13347-201ENSMUST00000120298 1353 ntBASIC11.44□□□□□ -0.58
Fdft1P53798 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Fdft1P53798 Gm13812-201ENSMUST00000118061 1347 ntBASIC11.44□□□□□ -0.58
Fdft1P53798 Gm13810-201ENSMUST00000118584 1347 ntBASIC11.44□□□□□ -0.58
Fdft1P53798 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC11.44□□□□□ -0.58
Fdft1P53798 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Fdft1P53798 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
Fdft1P53798 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Fdft1P53798 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC11.44□□□□□ -0.58
Fdft1P53798 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Fdft1P53798 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Fdft1P53798 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Fdft1P53798 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Fdft1P53798 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Fdft1P53798 Gm11663-201ENSMUST00000117888 290 ntBASIC11.44□□□□□ -0.58
Fdft1P53798 Gm6039-201ENSMUST00000121667 1250 ntBASIC11.44□□□□□ -0.58
Fdft1P53798 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Fdft1P53798 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Fdft1P53798 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Fdft1P53798 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC11.44□□□□□ -0.58
Fdft1P53798 Gm5982-201ENSMUST00000196234 512 ntBASIC11.44□□□□□ -0.58
Fdft1P53798 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC11.44□□□□□ -0.58
Fdft1P53798 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Fdft1P53798 Gm18212-201ENSMUST00000211678 889 ntBASIC11.44□□□□□ -0.58
Fdft1P53798 Gm7940-201ENSMUST00000218195 769 ntBASIC11.44□□□□□ -0.58
Fdft1P53798 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Fdft1P53798 Lect2-202ENSMUST00000225183 823 ntBASIC11.44□□□□□ -0.58
Fdft1P53798 AC133602.1-201ENSMUST00000227510 509 ntBASIC11.44□□□□□ -0.58
Fdft1P53798 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Fdft1P53798 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms