Protein–RNA interactions for Protein: P48678

Lmna, Prelamin-A/C, mousemouse

Known RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LmnaP48678 Gm43124-201ENSMUST00000201878 278 ntBASIC12.1□□□□□ -0.47
LmnaP48678 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC12.1□□□□□ -0.47
LmnaP48678 Gm45856-201ENSMUST00000212752 416 ntBASIC12.1□□□□□ -0.47
LmnaP48678 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LmnaP48678 Gm7441-201ENSMUST00000220697 1074 ntBASIC12.1□□□□□ -0.47
LmnaP48678 Gm19189-201ENSMUST00000221689 754 ntBASIC12.1□□□□□ -0.47
LmnaP48678 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
LmnaP48678 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
LmnaP48678 Gm10288-201ENSMUST00000084614 537 ntBASIC12.1□□□□□ -0.47
LmnaP48678 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LmnaP48678 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LmnaP48678 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.1□□□□□ -0.47
LmnaP48678 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LmnaP48678 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LmnaP48678 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LmnaP48678 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LmnaP48678 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
LmnaP48678 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LmnaP48678 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
LmnaP48678 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LmnaP48678 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LmnaP48678 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
LmnaP48678 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LmnaP48678 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.09□□□□□ -0.47
LmnaP48678 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
LmnaP48678 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
LmnaP48678 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
LmnaP48678 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LmnaP48678 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
LmnaP48678 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LmnaP48678 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
LmnaP48678 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
LmnaP48678 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LmnaP48678 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LmnaP48678 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC12.09□□□□□ -0.47
LmnaP48678 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LmnaP48678 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LmnaP48678 Skint8-205ENSMUST00000165046 1280 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
LmnaP48678 Gm28925-201ENSMUST00000188586 168 ntBASIC12.09□□□□□ -0.47
LmnaP48678 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC12.09□□□□□ -0.47
LmnaP48678 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC12.09□□□□□ -0.47
LmnaP48678 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC12.09□□□□□ -0.47
LmnaP48678 Gm2965-201ENSMUST00000198365 343 ntBASIC12.09□□□□□ -0.47
LmnaP48678 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.09□□□□□ -0.47
LmnaP48678 Gm9139-201ENSMUST00000218817 700 ntBASIC12.09□□□□□ -0.47
LmnaP48678 AC115122.1-201ENSMUST00000224850 1040 ntBASIC12.09□□□□□ -0.47
LmnaP48678 Ly96-201ENSMUST00000026881 632 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LmnaP48678 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LmnaP48678 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
LmnaP48678 5930422O12Rik-201ENSMUST00000059351 840 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
LmnaP48678 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
LmnaP48678 Gm45532-201ENSMUST00000210342 3620 ntBASIC12.09□□□□□ -0.47
LmnaP48678 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LmnaP48678 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
LmnaP48678 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LmnaP48678 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LmnaP48678 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LmnaP48678 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LmnaP48678 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LmnaP48678 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
LmnaP48678 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC12.09□□□□□ -0.47
LmnaP48678 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
LmnaP48678 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LmnaP48678 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.47
LmnaP48678 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
LmnaP48678 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
LmnaP48678 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
LmnaP48678 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
LmnaP48678 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LmnaP48678 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LmnaP48678 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LmnaP48678 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
LmnaP48678 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LmnaP48678 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
LmnaP48678 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LmnaP48678 AC124577.2-201ENSMUST00000217413 2420 ntBASIC12.08□□□□□ -0.48
LmnaP48678 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LmnaP48678 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LmnaP48678 AC154639.1-201ENSMUST00000224393 2849 ntBASIC12.08□□□□□ -0.48
LmnaP48678 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LmnaP48678 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
LmnaP48678 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LmnaP48678 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LmnaP48678 BC117090-201ENSMUST00000114850 387 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LmnaP48678 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
LmnaP48678 Gm7541-201ENSMUST00000118361 535 ntBASIC12.08□□□□□ -0.48
LmnaP48678 Gm14724-201ENSMUST00000118400 537 ntBASIC12.08□□□□□ -0.48
LmnaP48678 Gm11956-201ENSMUST00000119525 512 ntBASIC12.08□□□□□ -0.48
LmnaP48678 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LmnaP48678 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC12.08□□□□□ -0.48
LmnaP48678 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
LmnaP48678 Mir1956-201ENSMUST00000157748 65 ntBASIC12.08□□□□□ -0.48
LmnaP48678 Gm6485-201ENSMUST00000160676 439 ntBASIC12.08□□□□□ -0.48
LmnaP48678 Vmn1r206-201ENSMUST00000187140 1135 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
LmnaP48678 Gm37857-201ENSMUST00000191784 1199 ntBASIC12.08□□□□□ -0.48
LmnaP48678 Gm37641-201ENSMUST00000193837 239 ntBASIC12.08□□□□□ -0.48
LmnaP48678 Gm3318-201ENSMUST00000217604 1183 ntBASIC12.08□□□□□ -0.48
LmnaP48678 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC12.08□□□□□ -0.48
LmnaP48678 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
LmnaP48678 Gm9996-201ENSMUST00000070359 913 ntBASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms