Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Vps4bP46467 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.55
Vps4bP46467 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Vps4bP46467 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Vps4bP46467 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Vps4bP46467 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Vps4bP46467 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Vps4bP46467 Gm12857-201ENSMUST00000117678 592 ntBASIC11.64□□□□□ -0.55
Vps4bP46467 Gm11663-201ENSMUST00000117888 290 ntBASIC11.64□□□□□ -0.55
Vps4bP46467 Gm11783-201ENSMUST00000119549 885 ntBASIC11.64□□□□□ -0.55
Vps4bP46467 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Vps4bP46467 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Vps4bP46467 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC11.64□□□□□ -0.55
Vps4bP46467 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Vps4bP46467 AC153937.1-201ENSMUST00000218734 412 ntBASIC11.64□□□□□ -0.55
Vps4bP46467 AC154680.1-201ENSMUST00000224376 859 ntBASIC11.64□□□□□ -0.55
Vps4bP46467 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Vps4bP46467 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Vps4bP46467 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Vps4bP46467 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Vps4bP46467 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Vps4bP46467 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Vps4bP46467 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Vps4bP46467 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Vps4bP46467 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Vps4bP46467 Gm45496-201ENSMUST00000209918 2917 ntBASIC11.64□□□□□ -0.55
Vps4bP46467 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Vps4bP46467 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC11.64□□□□□ -0.55
Vps4bP46467 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Vps4bP46467 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Vps4bP46467 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Vps4bP46467 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Vps4bP46467 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Vps4bP46467 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Vps4bP46467 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Vps4bP46467 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Vps4bP46467 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Vps4bP46467 Gm5525-201ENSMUST00000190438 1312 ntBASIC11.63□□□□□ -0.55
Vps4bP46467 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Vps4bP46467 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Vps4bP46467 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Vps4bP46467 Gm45053-201ENSMUST00000206112 2499 ntBASIC11.63□□□□□ -0.55
Vps4bP46467 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC11.63□□□□□ -0.55
Vps4bP46467 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Vps4bP46467 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Vps4bP46467 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Vps4bP46467 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Vps4bP46467 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Vps4bP46467 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC11.63□□□□□ -0.55
Vps4bP46467 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Vps4bP46467 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Vps4bP46467 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC11.63□□□□□ -0.55
Vps4bP46467 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Vps4bP46467 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Vps4bP46467 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC11.63□□□□□ -0.55
Vps4bP46467 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC11.63□□□□□ -0.55
Vps4bP46467 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Vps4bP46467 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Vps4bP46467 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC11.63□□□□□ -0.55
Vps4bP46467 Gm3508-201ENSMUST00000186012 792 ntBASIC11.63□□□□□ -0.55
Vps4bP46467 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Vps4bP46467 Gm3332-201ENSMUST00000189337 928 ntBASIC11.63□□□□□ -0.55
Vps4bP46467 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC11.63□□□□□ -0.55
Vps4bP46467 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Vps4bP46467 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Vps4bP46467 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Vps4bP46467 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Vps4bP46467 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Vps4bP46467 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC11.63□□□□□ -0.55
Vps4bP46467 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Vps4bP46467 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Vps4bP46467 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Vps4bP46467 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Vps4bP46467 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Vps4bP46467 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Vps4bP46467 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Vps4bP46467 Gm43127-201ENSMUST00000195890 2789 ntBASIC11.63□□□□□ -0.55
Vps4bP46467 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Vps4bP46467 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Vps4bP46467 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Vps4bP46467 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Vps4bP46467 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Vps4bP46467 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Vps4bP46467 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Vps4bP46467 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Vps4bP46467 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Vps4bP46467 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Vps4bP46467 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Vps4bP46467 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Vps4bP46467 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Vps4bP46467 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Vps4bP46467 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Vps4bP46467 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Vps4bP46467 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Vps4bP46467 Gm36987-201ENSMUST00000194704 2979 ntBASIC11.62□□□□□ -0.55
Vps4bP46467 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Vps4bP46467 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Vps4bP46467 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC11.62□□□□□ -0.55
Vps4bP46467 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Vps4bP46467 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 75.1 ms