Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox18P43680 Gm11560-201ENSMUST00000117567 948 ntBASIC11.28□□□□□ -0.6
Sox18P43680 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.28□□□□□ -0.6
Sox18P43680 Gm14957-201ENSMUST00000121069 817 ntBASIC11.28□□□□□ -0.6
Sox18P43680 Gm12978-201ENSMUST00000121250 522 ntBASIC11.28□□□□□ -0.6
Sox18P43680 Gm14760-201ENSMUST00000121831 999 ntBASIC11.28□□□□□ -0.6
Sox18P43680 Gm12670-201ENSMUST00000123606 576 ntTSL 2 BASIC11.28□□□□□ -0.6
Sox18P43680 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC11.28□□□□□ -0.6
Sox18P43680 Gm17727-201ENSMUST00000171898 643 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Sox18P43680 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Sox18P43680 Gm4310-201ENSMUST00000177847 889 ntBASIC11.28□□□□□ -0.6
Sox18P43680 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox18P43680 Tceanc-203ENSMUST00000180322 1080 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Sox18P43680 Gm27039-201ENSMUST00000182438 962 ntBASIC11.28□□□□□ -0.6
Sox18P43680 Gm20379-201ENSMUST00000188317 1204 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Sox18P43680 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC11.28□□□□□ -0.6
Sox18P43680 AC161250.1-201ENSMUST00000213426 1111 ntBASIC11.28□□□□□ -0.6
Sox18P43680 Olfr692-202ENSMUST00000217827 1126 ntBASIC11.28□□□□□ -0.6
Sox18P43680 AC153532.1-201ENSMUST00000218126 1111 ntBASIC11.28□□□□□ -0.6
Sox18P43680 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sox18P43680 Gm36525-201ENSMUST00000222590 638 ntTSL 5 BASIC11.28□□□□□ -0.6
Sox18P43680 AC154527.3-201ENSMUST00000225519 989 ntBASIC11.28□□□□□ -0.6
Sox18P43680 Arhgef33-210ENSMUST00000225548 456 ntBASIC11.28□□□□□ -0.6
Sox18P43680 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox18P43680 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Sox18P43680 Gm5513-201ENSMUST00000072982 1218 ntBASIC11.28□□□□□ -0.6
Sox18P43680 Vpreb3-201ENSMUST00000000926 625 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox18P43680 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Sox18P43680 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox18P43680 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox18P43680 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC11.28□□□□□ -0.6
Sox18P43680 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Sox18P43680 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox18P43680 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox18P43680 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox18P43680 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox18P43680 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox18P43680 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.28□□□□□ -0.6
Sox18P43680 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sox18P43680 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Sox18P43680 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sox18P43680 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox18P43680 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox18P43680 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sox18P43680 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sox18P43680 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox18P43680 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC11.28□□□□□ -0.6
Sox18P43680 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC11.28□□□□□ -0.6
Sox18P43680 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.27□□□□□ -0.6
Sox18P43680 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.27□□□□□ -0.6
Sox18P43680 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Sox18P43680 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Sox18P43680 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC11.27□□□□□ -0.6
Sox18P43680 Gm18300-201ENSMUST00000192792 1406 ntBASIC11.27□□□□□ -0.6
Sox18P43680 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Sox18P43680 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC11.27□□□□□ -0.6
Sox18P43680 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.27□□□□□ -0.6
Sox18P43680 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Sox18P43680 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Sox18P43680 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC11.27□□□□□ -0.6
Sox18P43680 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sox18P43680 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Sox18P43680 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
Sox18P43680 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sox18P43680 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sox18P43680 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sox18P43680 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sox18P43680 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Sox18P43680 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sox18P43680 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Sox18P43680 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Sox18P43680 Gm23272-201ENSMUST00000104053 129 ntBASIC11.27□□□□□ -0.61
Sox18P43680 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC11.27□□□□□ -0.61
Sox18P43680 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Sox18P43680 Gm12419-201ENSMUST00000116649 636 ntBASIC11.27□□□□□ -0.61
Sox18P43680 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Sox18P43680 Gm15004-201ENSMUST00000119192 630 ntBASIC11.27□□□□□ -0.61
Sox18P43680 Gm12712-201ENSMUST00000120676 801 ntBASIC11.27□□□□□ -0.61
Sox18P43680 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sox18P43680 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC11.27□□□□□ -0.61
Sox18P43680 Gm5795-202ENSMUST00000166275 612 ntTSL 5 BASIC11.27□□□□□ -0.61
Sox18P43680 Gm8279-203ENSMUST00000170040 612 ntTSL 5 BASIC11.27□□□□□ -0.61
Sox18P43680 Mc5r-201ENSMUST00000172148 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sox18P43680 Scnm1-201ENSMUST00000172572 1054 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Sox18P43680 Gm10413-202ENSMUST00000177913 612 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
Sox18P43680 AC238811.4-201ENSMUST00000178019 1246 ntBASIC11.27□□□□□ -0.61
Sox18P43680 Gm3424-202ENSMUST00000178418 618 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Sox18P43680 Gm3187-201ENSMUST00000178429 618 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Sox18P43680 Gm10338-202ENSMUST00000178623 612 ntTSL 5 BASIC11.27□□□□□ -0.61
Sox18P43680 AC238940.3-201ENSMUST00000178830 1246 ntBASIC11.27□□□□□ -0.61
Sox18P43680 Gm8246-201ENSMUST00000179411 618 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Sox18P43680 Gm3012-202ENSMUST00000179486 612 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
Sox18P43680 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Sox18P43680 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
Sox18P43680 Gm44315-201ENSMUST00000203041 219 ntBASIC11.27□□□□□ -0.61
Sox18P43680 AC069561.1-201ENSMUST00000213750 424 ntBASIC11.27□□□□□ -0.61
Sox18P43680 Gm39307-201ENSMUST00000216780 1037 ntTSL 5 BASIC11.27□□□□□ -0.61
Sox18P43680 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC11.27□□□□□ -0.61
Sox18P43680 Gm18968-201ENSMUST00000221319 862 ntBASIC11.27□□□□□ -0.61
Sox18P43680 AC124752.1-201ENSMUST00000222131 776 ntTSL 5 BASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms