Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Gm12566-201ENSMUST00000121479 359 ntBASIC10.49□□□□□ -0.73
Nkx2-2P42586 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nkx2-2P42586 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC10.49□□□□□ -0.73
Nkx2-2P42586 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC10.49□□□□□ -0.73
Nkx2-2P42586 Mir7070-201ENSMUST00000183657 86 ntBASIC10.49□□□□□ -0.73
Nkx2-2P42586 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC10.49□□□□□ -0.73
Nkx2-2P42586 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC10.49□□□□□ -0.73
Nkx2-2P42586 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC10.49□□□□□ -0.73
Nkx2-2P42586 Mettl6-204ENSMUST00000227595 1027 ntBASIC10.49□□□□□ -0.73
Nkx2-2P42586 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nkx2-2P42586 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nkx2-2P42586 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Nkx2-2P42586 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Nkx2-2P42586 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Nkx2-2P42586 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nkx2-2P42586 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nkx2-2P42586 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Nkx2-2P42586 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Nkx2-2P42586 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nkx2-2P42586 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Nkx2-2P42586 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC10.49□□□□□ -0.73
Nkx2-2P42586 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nkx2-2P42586 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC10.49□□□□□ -0.73
Nkx2-2P42586 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nkx2-2P42586 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nkx2-2P42586 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nkx2-2P42586 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nkx2-2P42586 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nkx2-2P42586 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nkx2-2P42586 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nkx2-2P42586 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC10.49□□□□□ -0.73
Nkx2-2P42586 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nkx2-2P42586 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nkx2-2P42586 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nkx2-2P42586 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx2-2P42586 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Nkx2-2P42586 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx2-2P42586 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx2-2P42586 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx2-2P42586 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx2-2P42586 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx2-2P42586 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx2-2P42586 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Nkx2-2P42586 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx2-2P42586 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx2-2P42586 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx2-2P42586 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Nkx2-2P42586 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx2-2P42586 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC10.48□□□□□ -0.73
Nkx2-2P42586 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Nkx2-2P42586 Gm11956-201ENSMUST00000119525 512 ntBASIC10.48□□□□□ -0.73
Nkx2-2P42586 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx2-2P42586 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC10.48□□□□□ -0.73
Nkx2-2P42586 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC10.48□□□□□ -0.73
Nkx2-2P42586 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx2-2P42586 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx2-2P42586 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC10.48□□□□□ -0.73
Nkx2-2P42586 Gm37981-201ENSMUST00000194280 535 ntBASIC10.48□□□□□ -0.73
Nkx2-2P42586 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC10.48□□□□□ -0.73
Nkx2-2P42586 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
Nkx2-2P42586 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Nkx2-2P42586 AC155637.1-201ENSMUST00000218560 636 ntBASIC10.48□□□□□ -0.73
Nkx2-2P42586 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx2-2P42586 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC10.48□□□□□ -0.73
Nkx2-2P42586 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx2-2P42586 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx2-2P42586 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx2-2P42586 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx2-2P42586 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx2-2P42586 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx2-2P42586 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx2-2P42586 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx2-2P42586 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx2-2P42586 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Nkx2-2P42586 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx2-2P42586 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx2-2P42586 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx2-2P42586 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC10.48□□□□□ -0.73
Nkx2-2P42586 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx2-2P42586 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx2-2P42586 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx2-2P42586 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC10.48□□□□□ -0.73
Nkx2-2P42586 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx2-2P42586 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC10.48□□□□□ -0.73
Nkx2-2P42586 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Nkx2-2P42586 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx2-2P42586 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Nkx2-2P42586 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Nkx2-2P42586 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx2-2P42586 AC166836.1-201ENSMUST00000219933 1795 ntBASIC10.47□□□□□ -0.73
Nkx2-2P42586 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx2-2P42586 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC10.47□□□□□ -0.73
Nkx2-2P42586 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx2-2P42586 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Nkx2-2P42586 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx2-2P42586 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Nkx2-2P42586 Gm15615-201ENSMUST00000118876 198 ntBASIC10.47□□□□□ -0.73
Nkx2-2P42586 Mup-ps26-201ENSMUST00000121751 202 ntBASIC10.47□□□□□ -0.73
Nkx2-2P42586 Gm8737-201ENSMUST00000122208 642 ntBASIC10.47□□□□□ -0.73
Nkx2-2P42586 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC10.47□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms