Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
TfamP40630 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
TfamP40630 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
TfamP40630 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
TfamP40630 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
TfamP40630 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
TfamP40630 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
TfamP40630 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
TfamP40630 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
TfamP40630 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
TfamP40630 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC11.09□□□□□ -0.63
TfamP40630 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
TfamP40630 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
TfamP40630 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
TfamP40630 Nos1-206ENSMUST00000142742 10123 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
TfamP40630 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
TfamP40630 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
TfamP40630 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC11.09□□□□□ -0.63
TfamP40630 Smarca2-201ENSMUST00000025862 5921 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
TfamP40630 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
TfamP40630 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
TfamP40630 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
TfamP40630 Gm12857-201ENSMUST00000117678 592 ntBASIC11.09□□□□□ -0.63
TfamP40630 Gm14130-201ENSMUST00000118417 987 ntBASIC11.09□□□□□ -0.63
TfamP40630 Gm15711-201ENSMUST00000118889 535 ntBASIC11.09□□□□□ -0.63
TfamP40630 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC11.09□□□□□ -0.63
TfamP40630 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
TfamP40630 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
TfamP40630 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
TfamP40630 Gm26047-201ENSMUST00000157308 113 ntBASIC11.09□□□□□ -0.63
TfamP40630 Gm3329-201ENSMUST00000159873 556 ntBASIC11.09□□□□□ -0.63
TfamP40630 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC11.09□□□□□ -0.63
TfamP40630 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC11.09□□□□□ -0.63
TfamP40630 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
TfamP40630 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
TfamP40630 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
TfamP40630 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
TfamP40630 Gm3332-201ENSMUST00000189337 928 ntBASIC11.09□□□□□ -0.63
TfamP40630 Gm34767-201ENSMUST00000191813 1062 ntBASIC11.09□□□□□ -0.63
TfamP40630 Gm26047-202ENSMUST00000198840 115 ntBASIC11.09□□□□□ -0.63
TfamP40630 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
TfamP40630 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC11.09□□□□□ -0.63
TfamP40630 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
TfamP40630 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
TfamP40630 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
TfamP40630 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
TfamP40630 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
TfamP40630 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
TfamP40630 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
TfamP40630 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
TfamP40630 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
TfamP40630 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
TfamP40630 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
TfamP40630 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
TfamP40630 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
TfamP40630 Tro-203ENSMUST00000112709 6610 ntAPPRIS P3 TSL 5 BASIC11.09□□□□□ -0.63
TfamP40630 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC11.09□□□□□ -0.63
TfamP40630 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
TfamP40630 Gm44207-201ENSMUST00000204568 1424 ntBASIC11.09□□□□□ -0.63
TfamP40630 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
TfamP40630 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.63
TfamP40630 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.63
TfamP40630 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
TfamP40630 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
TfamP40630 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
TfamP40630 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
TfamP40630 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
TfamP40630 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
TfamP40630 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
TfamP40630 Gm23596-201ENSMUST00000104304 132 ntBASIC11.08□□□□□ -0.64
TfamP40630 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
TfamP40630 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC11.08□□□□□ -0.64
TfamP40630 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
TfamP40630 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
TfamP40630 Gm11663-201ENSMUST00000117888 290 ntBASIC11.08□□□□□ -0.64
TfamP40630 Gm12380-201ENSMUST00000119012 544 ntBASIC11.08□□□□□ -0.64
TfamP40630 Gm11783-201ENSMUST00000119549 885 ntBASIC11.08□□□□□ -0.64
TfamP40630 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC11.08□□□□□ -0.64
TfamP40630 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
TfamP40630 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC11.08□□□□□ -0.64
TfamP40630 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC11.08□□□□□ -0.64
TfamP40630 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC11.08□□□□□ -0.64
TfamP40630 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
TfamP40630 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
TfamP40630 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
TfamP40630 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
TfamP40630 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
TfamP40630 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
TfamP40630 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
TfamP40630 Gm5537-201ENSMUST00000091117 1252 ntBASIC11.08□□□□□ -0.64
TfamP40630 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
TfamP40630 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
TfamP40630 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
TfamP40630 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
TfamP40630 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
TfamP40630 Gm38089-201ENSMUST00000193585 1514 ntBASIC11.08□□□□□ -0.64
TfamP40630 Gm29358-202ENSMUST00000187941 3227 ntBASIC11.08□□□□□ -0.64
TfamP40630 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
TfamP40630 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
TfamP40630 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms