Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Upk2P38575 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC10.04□□□□□ -0.8
Upk2P38575 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Upk2P38575 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Upk2P38575 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
Upk2P38575 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC10.04□□□□□ -0.8
Upk2P38575 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC10.04□□□□□ -0.8
Upk2P38575 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Upk2P38575 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Upk2P38575 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC10.04□□□□□ -0.8
Upk2P38575 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Upk2P38575 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC10.04□□□□□ -0.8
Upk2P38575 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC10.04□□□□□ -0.8
Upk2P38575 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Upk2P38575 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Upk2P38575 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Upk2P38575 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Upk2P38575 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Upk2P38575 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Upk2P38575 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Upk2P38575 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Upk2P38575 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Upk2P38575 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Upk2P38575 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC10.03□□□□□ -0.8
Upk2P38575 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Upk2P38575 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Upk2P38575 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Upk2P38575 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Upk2P38575 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Upk2P38575 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Upk2P38575 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Upk2P38575 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Upk2P38575 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Upk2P38575 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Upk2P38575 Gm12129-201ENSMUST00000120104 1147 ntBASIC10.03□□□□□ -0.8
Upk2P38575 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC10.03□□□□□ -0.8
Upk2P38575 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC10.03□□□□□ -0.8
Upk2P38575 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Upk2P38575 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC10.03□□□□□ -0.8
Upk2P38575 Gm22846-201ENSMUST00000157706 270 ntBASIC10.03□□□□□ -0.8
Upk2P38575 Gm6397-201ENSMUST00000161973 1069 ntBASIC10.03□□□□□ -0.8
Upk2P38575 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Upk2P38575 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Upk2P38575 Mir6927-201ENSMUST00000184494 71 ntBASIC10.03□□□□□ -0.8
Upk2P38575 Gm29199-201ENSMUST00000187766 775 ntBASIC10.03□□□□□ -0.8
Upk2P38575 Gm37246-201ENSMUST00000192665 835 ntBASIC10.03□□□□□ -0.8
Upk2P38575 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Upk2P38575 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC10.03□□□□□ -0.8
Upk2P38575 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC10.03□□□□□ -0.8
Upk2P38575 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Upk2P38575 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Upk2P38575 Gm5996-201ENSMUST00000211110 718 ntBASIC10.03□□□□□ -0.8
Upk2P38575 Gm5363-201ENSMUST00000211927 938 ntBASIC10.03□□□□□ -0.8
Upk2P38575 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC10.03□□□□□ -0.8
Upk2P38575 Nudt13-207ENSMUST00000224311 1574 ntBASIC10.03□□□□□ -0.8
Upk2P38575 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Upk2P38575 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Upk2P38575 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Upk2P38575 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Upk2P38575 Gm7551-201ENSMUST00000089593 1074 ntBASIC10.03□□□□□ -0.8
Upk2P38575 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Upk2P38575 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Upk2P38575 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Upk2P38575 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Upk2P38575 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Upk2P38575 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Upk2P38575 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Upk2P38575 AC113441.2-201ENSMUST00000221538 1468 ntBASIC10.03□□□□□ -0.8
Upk2P38575 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Upk2P38575 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Upk2P38575 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Upk2P38575 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Upk2P38575 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Upk2P38575 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Upk2P38575 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Upk2P38575 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Upk2P38575 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC10.02□□□□□ -0.8
Upk2P38575 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC10.02□□□□□ -0.8
Upk2P38575 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Upk2P38575 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Upk2P38575 AC109214.1-201ENSMUST00000219520 1372 ntBASIC10.02□□□□□ -0.8
Upk2P38575 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Upk2P38575 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC10.02□□□□□ -0.8
Upk2P38575 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Upk2P38575 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.8
Upk2P38575 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Upk2P38575 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Upk2P38575 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC10.02□□□□□ -0.81
Upk2P38575 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Upk2P38575 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Upk2P38575 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Upk2P38575 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Upk2P38575 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC10.02□□□□□ -0.81
Upk2P38575 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
Upk2P38575 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Upk2P38575 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Upk2P38575 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Upk2P38575 Mir680-2-201ENSMUST00000102163 110 ntBASIC10.02□□□□□ -0.81
Upk2P38575 Gm22920-201ENSMUST00000102175 109 ntBASIC10.02□□□□□ -0.81
Upk2P38575 Gm23251-201ENSMUST00000103773 110 ntBASIC10.02□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 71.8 ms