Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Usp4P35123 Gm37600-201ENSMUST00000193764 3292 ntBASIC12.04□□□□□ -0.48
Usp4P35123 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Usp4P35123 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Usp4P35123 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Usp4P35123 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Usp4P35123 CT025681.1-201ENSMUST00000225453 1855 ntBASIC12.04□□□□□ -0.48
Usp4P35123 Gm44369-201ENSMUST00000204543 2175 ntBASIC12.03□□□□□ -0.48
Usp4P35123 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Usp4P35123 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Usp4P35123 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Usp4P35123 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Usp4P35123 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Usp4P35123 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Usp4P35123 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Usp4P35123 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Usp4P35123 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Usp4P35123 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Usp4P35123 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Usp4P35123 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Usp4P35123 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Usp4P35123 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.03□□□□□ -0.48
Usp4P35123 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC12.03□□□□□ -0.48
Usp4P35123 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC12.03□□□□□ -0.48
Usp4P35123 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC12.03□□□□□ -0.48
Usp4P35123 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Usp4P35123 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Usp4P35123 Gm43966-201ENSMUST00000203301 612 ntBASIC12.03□□□□□ -0.48
Usp4P35123 Gm18730-201ENSMUST00000218038 343 ntBASIC12.03□□□□□ -0.48
Usp4P35123 Gzmn-202ENSMUST00000225535 989 ntBASIC12.03□□□□□ -0.48
Usp4P35123 CT025694.1-201ENSMUST00000226188 934 ntBASIC12.03□□□□□ -0.48
Usp4P35123 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC12.03□□□□□ -0.48
Usp4P35123 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Usp4P35123 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Usp4P35123 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Usp4P35123 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Usp4P35123 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Usp4P35123 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Usp4P35123 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Usp4P35123 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Usp4P35123 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Usp4P35123 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Usp4P35123 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
Usp4P35123 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Usp4P35123 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Usp4P35123 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Usp4P35123 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Usp4P35123 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Usp4P35123 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Usp4P35123 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Usp4P35123 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Usp4P35123 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Usp4P35123 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Usp4P35123 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Usp4P35123 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC12.02□□□□□ -0.48
Usp4P35123 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.48
Usp4P35123 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Usp4P35123 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Usp4P35123 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
Usp4P35123 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.48
Usp4P35123 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
Usp4P35123 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Usp4P35123 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Usp4P35123 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Usp4P35123 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Usp4P35123 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.49
Usp4P35123 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Usp4P35123 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC12.02□□□□□ -0.49
Usp4P35123 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC12.02□□□□□ -0.49
Usp4P35123 Gm9034-201ENSMUST00000182071 1005 ntBASIC12.02□□□□□ -0.49
Usp4P35123 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC12.02□□□□□ -0.49
Usp4P35123 Gm19287-201ENSMUST00000203190 358 ntBASIC12.02□□□□□ -0.49
Usp4P35123 Gm45691-201ENSMUST00000206905 1120 ntBASIC12.02□□□□□ -0.49
Usp4P35123 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC12.02□□□□□ -0.49
Usp4P35123 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Usp4P35123 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Usp4P35123 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Usp4P35123 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Usp4P35123 Gm5124-202ENSMUST00000132683 2083 ntBASIC12.02□□□□□ -0.49
Usp4P35123 Gm45495-201ENSMUST00000200940 1700 ntBASIC12.02□□□□□ -0.49
Usp4P35123 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Usp4P35123 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Usp4P35123 AC131586.1-201ENSMUST00000228844 2964 ntBASIC12.02□□□□□ -0.49
Usp4P35123 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Usp4P35123 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Usp4P35123 AC167565.1-201ENSMUST00000226980 1833 ntBASIC12.02□□□□□ -0.49
Usp4P35123 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Usp4P35123 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Usp4P35123 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Usp4P35123 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Usp4P35123 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Usp4P35123 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Usp4P35123 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Usp4P35123 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Usp4P35123 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Usp4P35123 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Usp4P35123 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Usp4P35123 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Usp4P35123 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Usp4P35123 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms