Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Col2a1P28481 Gm43931-201ENSMUST00000204817 2870 ntBASIC12.85□□□□□ -0.35
Col2a1P28481 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC12.85□□□□□ -0.35
Col2a1P28481 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.85□□□□□ -0.35
Col2a1P28481 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.85□□□□□ -0.35
Col2a1P28481 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col2a1P28481 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Col2a1P28481 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Col2a1P28481 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col2a1P28481 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col2a1P28481 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col2a1P28481 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Col2a1P28481 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col2a1P28481 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col2a1P28481 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col2a1P28481 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col2a1P28481 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC12.85□□□□□ -0.35
Col2a1P28481 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Col2a1P28481 Lrrc75aos2-202ENSMUST00000128647 1227 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Col2a1P28481 Gm24074-201ENSMUST00000158178 260 ntBASIC12.85□□□□□ -0.35
Col2a1P28481 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Col2a1P28481 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Col2a1P28481 Gm20414-201ENSMUST00000172918 646 ntBASIC12.85□□□□□ -0.35
Col2a1P28481 Gm20392-201ENSMUST00000173047 701 ntBASIC12.85□□□□□ -0.35
Col2a1P28481 Mir8091-201ENSMUST00000183602 139 ntBASIC12.85□□□□□ -0.35
Col2a1P28481 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Col2a1P28481 Rpl15-ps5-201ENSMUST00000205636 605 ntBASIC12.85□□□□□ -0.35
Col2a1P28481 Gm6855-201ENSMUST00000206307 790 ntBASIC12.85□□□□□ -0.35
Col2a1P28481 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC12.85□□□□□ -0.35
Col2a1P28481 Gm18042-201ENSMUST00000219887 790 ntBASIC12.85□□□□□ -0.35
Col2a1P28481 Gm2696-202ENSMUST00000220393 684 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Col2a1P28481 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Col2a1P28481 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Col2a1P28481 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Col2a1P28481 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col2a1P28481 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Col2a1P28481 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
Col2a1P28481 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col2a1P28481 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC12.84□□□□□ -0.35
Col2a1P28481 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Col2a1P28481 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Col2a1P28481 Ccr6-205ENSMUST00000177568 1334 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col2a1P28481 Gm35363-201ENSMUST00000209330 1317 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Col2a1P28481 Gm15984-202ENSMUST00000156466 1534 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Col2a1P28481 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col2a1P28481 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Col2a1P28481 B4galnt2-201ENSMUST00000038343 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col2a1P28481 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC12.84□□□□□ -0.35
Col2a1P28481 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Col2a1P28481 AC122811.1-201ENSMUST00000222257 2921 ntBASIC12.84□□□□□ -0.35
Col2a1P28481 Gm19027-201ENSMUST00000187291 1355 ntBASIC12.84□□□□□ -0.35
Col2a1P28481 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Col2a1P28481 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Col2a1P28481 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col2a1P28481 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Col2a1P28481 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col2a1P28481 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col2a1P28481 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col2a1P28481 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Col2a1P28481 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC12.84□□□□□ -0.35
Col2a1P28481 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Col2a1P28481 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC12.84□□□□□ -0.35
Col2a1P28481 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Col2a1P28481 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Col2a1P28481 Gm22937-201ENSMUST00000103954 131 ntBASIC12.84□□□□□ -0.35
Col2a1P28481 Gm13039-201ENSMUST00000118638 794 ntBASIC12.84□□□□□ -0.35
Col2a1P28481 Treml4-203ENSMUST00000136272 811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col2a1P28481 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC12.84□□□□□ -0.35
Col2a1P28481 Treml4-206ENSMUST00000154335 838 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col2a1P28481 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col2a1P28481 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Col2a1P28481 Gm43249-201ENSMUST00000200464 458 ntBASIC12.84□□□□□ -0.35
Col2a1P28481 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col2a1P28481 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col2a1P28481 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col2a1P28481 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col2a1P28481 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Col2a1P28481 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC12.83□□□□□ -0.35
Col2a1P28481 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.35
Col2a1P28481 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.35
Col2a1P28481 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Col2a1P28481 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Col2a1P28481 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Col2a1P28481 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Col2a1P28481 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC12.83□□□□□ -0.35
Col2a1P28481 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Col2a1P28481 Gm45206-201ENSMUST00000206885 2285 ntBASIC12.83□□□□□ -0.36
Col2a1P28481 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col2a1P28481 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col2a1P28481 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col2a1P28481 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col2a1P28481 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Col2a1P28481 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Col2a1P28481 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col2a1P28481 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Col2a1P28481 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col2a1P28481 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col2a1P28481 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Col2a1P28481 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col2a1P28481 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms