Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Col1a1P11087 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col1a1P11087 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Col1a1P11087 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.3□□□□□ -0.28
Col1a1P11087 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Col1a1P11087 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col1a1P11087 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Col1a1P11087 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col1a1P11087 Selenbp2-204ENSMUST00000173849 1323 ntTSL 5 BASIC13.3□□□□□ -0.28
Col1a1P11087 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col1a1P11087 Gm43152-201ENSMUST00000202495 1638 ntBASIC13.3□□□□□ -0.28
Col1a1P11087 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col1a1P11087 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col1a1P11087 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col1a1P11087 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col1a1P11087 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col1a1P11087 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC13.3□□□□□ -0.28
Col1a1P11087 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col1a1P11087 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col1a1P11087 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col1a1P11087 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col1a1P11087 Gm42498-201ENSMUST00000199981 1372 ntBASIC13.3□□□□□ -0.28
Col1a1P11087 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col1a1P11087 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Col1a1P11087 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Col1a1P11087 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col1a1P11087 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col1a1P11087 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Col1a1P11087 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC13.3□□□□□ -0.28
Col1a1P11087 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Col1a1P11087 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col1a1P11087 Ntm-202ENSMUST00000115236 1072 ntTSL 5 BASIC13.29□□□□□ -0.28
Col1a1P11087 1700112K13Rik-201ENSMUST00000141892 701 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col1a1P11087 Gm26313-201ENSMUST00000157770 308 ntBASIC13.29□□□□□ -0.28
Col1a1P11087 Gm17226-201ENSMUST00000166637 780 ntTSL 3 BASIC13.29□□□□□ -0.28
Col1a1P11087 Ly6i-202ENSMUST00000166694 620 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col1a1P11087 AC164087.2-201ENSMUST00000216206 1072 ntBASIC13.29□□□□□ -0.28
Col1a1P11087 Nsmce2-203ENSMUST00000227173 1122 ntBASIC13.29□□□□□ -0.28
Col1a1P11087 Cenpx-201ENSMUST00000026137 692 ntTSL 2 BASIC13.29□□□□□ -0.28
Col1a1P11087 Rps3a2-201ENSMUST00000074245 792 ntBASIC13.29□□□□□ -0.28
Col1a1P11087 Rps3a3-201ENSMUST00000074680 795 ntBASIC13.29□□□□□ -0.28
Col1a1P11087 Olfr700-201ENSMUST00000079936 951 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Col1a1P11087 Nt5dc1-202ENSMUST00000099973 761 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col1a1P11087 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col1a1P11087 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col1a1P11087 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col1a1P11087 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Col1a1P11087 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col1a1P11087 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col1a1P11087 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC13.29□□□□□ -0.28
Col1a1P11087 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC13.29□□□□□ -0.28
Col1a1P11087 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC13.29□□□□□ -0.28
Col1a1P11087 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC13.29□□□□□ -0.28
Col1a1P11087 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col1a1P11087 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col1a1P11087 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col1a1P11087 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col1a1P11087 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col1a1P11087 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.29□□□□□ -0.28
Col1a1P11087 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col1a1P11087 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.29□□□□□ -0.28
Col1a1P11087 Gm8659-201ENSMUST00000120024 1084 ntBASIC13.29□□□□□ -0.28
Col1a1P11087 Gm7765-201ENSMUST00000182585 974 ntBASIC13.29□□□□□ -0.28
Col1a1P11087 Gm5335-201ENSMUST00000182995 1000 ntBASIC13.29□□□□□ -0.28
Col1a1P11087 Gm28651-201ENSMUST00000185335 644 ntTSL 3 BASIC13.29□□□□□ -0.28
Col1a1P11087 Auts2-216ENSMUST00000185450 144 ntTSL 5 BASIC13.29□□□□□ -0.28
Col1a1P11087 Gm44605-201ENSMUST00000206892 949 ntBASIC13.29□□□□□ -0.28
Col1a1P11087 Gm45680-201ENSMUST00000211135 214 ntTSL 3 BASIC13.29□□□□□ -0.28
Col1a1P11087 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col1a1P11087 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col1a1P11087 Gm45416-201ENSMUST00000209713 2201 ntBASIC13.28□□□□□ -0.28
Col1a1P11087 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Col1a1P11087 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col1a1P11087 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col1a1P11087 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC13.28□□□□□ -0.28
Col1a1P11087 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col1a1P11087 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Col1a1P11087 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col1a1P11087 Gm38194-201ENSMUST00000194529 2211 ntBASIC13.28□□□□□ -0.28
Col1a1P11087 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col1a1P11087 Poc1a-209ENSMUST00000216228 1431 ntTSL 5 BASIC13.28□□□□□ -0.28
Col1a1P11087 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col1a1P11087 Moxd2-201ENSMUST00000031937 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col1a1P11087 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col1a1P11087 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Col1a1P11087 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC13.28□□□□□ -0.28
Col1a1P11087 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col1a1P11087 Gm24933-201ENSMUST00000103762 110 ntBASIC13.28□□□□□ -0.28
Col1a1P11087 Gm23252-201ENSMUST00000103776 110 ntBASIC13.28□□□□□ -0.28
Col1a1P11087 Mapk8-202ENSMUST00000111942 927 ntTSL 5 BASIC13.28□□□□□ -0.28
Col1a1P11087 Gm5944-201ENSMUST00000118182 1001 ntBASIC13.28□□□□□ -0.28
Col1a1P11087 Gm12986-201ENSMUST00000119037 967 ntBASIC13.28□□□□□ -0.28
Col1a1P11087 Gm15982-201ENSMUST00000121681 554 ntBASIC13.28□□□□□ -0.28
Col1a1P11087 Gm25288-201ENSMUST00000122800 265 ntBASIC13.28□□□□□ -0.28
Col1a1P11087 Gm15498-201ENSMUST00000126693 723 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col1a1P11087 Gm12606-202ENSMUST00000129527 1184 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col1a1P11087 Gm12056-201ENSMUST00000148364 1257 ntTSL 5 BASIC13.28□□□□□ -0.28
Col1a1P11087 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col1a1P11087 Gm26443-201ENSMUST00000179610 110 ntBASIC13.28□□□□□ -0.28
Col1a1P11087 Gm8601-201ENSMUST00000182096 909 ntBASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms