Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Ccl3P10855 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC10.11□□□□□ -0.79
Ccl3P10855 Gm42433-201ENSMUST00000196806 940 ntBASIC10.11□□□□□ -0.79
Ccl3P10855 Gm42779-201ENSMUST00000198807 406 ntBASIC10.11□□□□□ -0.79
Ccl3P10855 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Ccl3P10855 Gm6855-201ENSMUST00000206307 790 ntBASIC10.11□□□□□ -0.79
Ccl3P10855 Gm44814-201ENSMUST00000207018 434 ntBASIC10.11□□□□□ -0.79
Ccl3P10855 Gm9102-201ENSMUST00000219250 465 ntBASIC10.11□□□□□ -0.79
Ccl3P10855 9430078K24Rik-203ENSMUST00000220293 638 ntTSL 3 BASIC10.11□□□□□ -0.79
Ccl3P10855 Id2-203ENSMUST00000222667 958 ntBASIC10.11□□□□□ -0.79
Ccl3P10855 AC115304.2-201ENSMUST00000226399 332 ntBASIC10.11□□□□□ -0.79
Ccl3P10855 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Ccl3P10855 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Ccl3P10855 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Ccl3P10855 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Ccl3P10855 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Ccl3P10855 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Ccl3P10855 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Ccl3P10855 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Ccl3P10855 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Ccl3P10855 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Ccl3P10855 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Ccl3P10855 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Ccl3P10855 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Ccl3P10855 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Ccl3P10855 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Ccl3P10855 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Ccl3P10855 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Ccl3P10855 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Ccl3P10855 Gm5308-201ENSMUST00000196752 1354 ntBASIC10.11□□□□□ -0.79
Ccl3P10855 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC10.11□□□□□ -0.79
Ccl3P10855 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Ccl3P10855 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Ccl3P10855 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Ccl3P10855 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Ccl3P10855 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Ccl3P10855 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ccl3P10855 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC10.1□□□□□ -0.79
Ccl3P10855 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC10.1□□□□□ -0.79
Ccl3P10855 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Ccl3P10855 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ccl3P10855 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Ccl3P10855 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Ccl3P10855 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ccl3P10855 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ccl3P10855 Gm27177-202ENSMUST00000183514 2703 ntBASIC10.1□□□□□ -0.79
Ccl3P10855 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ccl3P10855 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Ccl3P10855 Gm20633-201ENSMUST00000176742 2831 ntBASIC10.1□□□□□ -0.79
Ccl3P10855 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ccl3P10855 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ccl3P10855 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ccl3P10855 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Ccl3P10855 Gm23400-201ENSMUST00000174994 102 ntBASIC10.1□□□□□ -0.79
Ccl3P10855 Gm26463-201ENSMUST00000175065 101 ntBASIC10.1□□□□□ -0.79
Ccl3P10855 Gm24332-201ENSMUST00000175102 102 ntBASIC10.1□□□□□ -0.79
Ccl3P10855 Gm25959-201ENSMUST00000175112 102 ntBASIC10.1□□□□□ -0.79
Ccl3P10855 Gm22475-201ENSMUST00000175169 102 ntBASIC10.1□□□□□ -0.79
Ccl3P10855 Gm22903-201ENSMUST00000175193 102 ntBASIC10.1□□□□□ -0.79
Ccl3P10855 Gm25070-201ENSMUST00000175237 102 ntBASIC10.1□□□□□ -0.79
Ccl3P10855 Gm24159-201ENSMUST00000175264 102 ntBASIC10.1□□□□□ -0.79
Ccl3P10855 Gm25299-201ENSMUST00000175283 102 ntBASIC10.1□□□□□ -0.79
Ccl3P10855 Gm23798-201ENSMUST00000175560 102 ntBASIC10.1□□□□□ -0.79
Ccl3P10855 Gm23802-201ENSMUST00000175565 102 ntBASIC10.1□□□□□ -0.79
Ccl3P10855 Gm25708-201ENSMUST00000177687 102 ntBASIC10.1□□□□□ -0.79
Ccl3P10855 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Ccl3P10855 Gm24370-201ENSMUST00000178007 102 ntBASIC10.1□□□□□ -0.79
Ccl3P10855 Gm23049-201ENSMUST00000178068 102 ntBASIC10.1□□□□□ -0.79
Ccl3P10855 Gm28019-201ENSMUST00000178138 101 ntBASIC10.1□□□□□ -0.79
Ccl3P10855 Gm25571-201ENSMUST00000178322 102 ntBASIC10.1□□□□□ -0.79
Ccl3P10855 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Ccl3P10855 Gm25355-201ENSMUST00000178456 101 ntBASIC10.1□□□□□ -0.79
Ccl3P10855 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Ccl3P10855 Gm24975-201ENSMUST00000178492 101 ntBASIC10.1□□□□□ -0.79
Ccl3P10855 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Ccl3P10855 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC10.1□□□□□ -0.79
Ccl3P10855 Gm23189-201ENSMUST00000178954 102 ntBASIC10.1□□□□□ -0.79
Ccl3P10855 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Ccl3P10855 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Ccl3P10855 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Ccl3P10855 Gm25100-201ENSMUST00000179750 101 ntBASIC10.1□□□□□ -0.79
Ccl3P10855 Gm23064-201ENSMUST00000179866 101 ntBASIC10.1□□□□□ -0.79
Ccl3P10855 Gm9162-201ENSMUST00000182081 991 ntBASIC10.1□□□□□ -0.79
Ccl3P10855 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC10.1□□□□□ -0.79
Ccl3P10855 AC122024.3-201ENSMUST00000217719 294 ntBASIC10.1□□□□□ -0.79
Ccl3P10855 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Ccl3P10855 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Ccl3P10855 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Ccl3P10855 Spink2-201ENSMUST00000065216 631 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ccl3P10855 Gm25580-201ENSMUST00000083409 327 ntBASIC10.1□□□□□ -0.79
Ccl3P10855 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Ccl3P10855 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ccl3P10855 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Ccl3P10855 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Ccl3P10855 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ccl3P10855 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Ccl3P10855 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
Ccl3P10855 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ccl3P10855 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ccl3P10855 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms