Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
PtcraP0C6B2 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
PtcraP0C6B2 Nap1l2-201ENSMUST00000121720 2465 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
PtcraP0C6B2 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
PtcraP0C6B2 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
PtcraP0C6B2 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC10.01□□□□□ -0.81
PtcraP0C6B2 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
PtcraP0C6B2 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
PtcraP0C6B2 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC10.01□□□□□ -0.81
PtcraP0C6B2 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
PtcraP0C6B2 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
PtcraP0C6B2 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC10.01□□□□□ -0.81
PtcraP0C6B2 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
PtcraP0C6B2 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC10.01□□□□□ -0.81
PtcraP0C6B2 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
PtcraP0C6B2 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
PtcraP0C6B2 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
PtcraP0C6B2 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
PtcraP0C6B2 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
PtcraP0C6B2 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
PtcraP0C6B2 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC10.01□□□□□ -0.81
PtcraP0C6B2 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
PtcraP0C6B2 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC10.01□□□□□ -0.81
PtcraP0C6B2 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC10.01□□□□□ -0.81
PtcraP0C6B2 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC10.01□□□□□ -0.81
PtcraP0C6B2 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC10.01□□□□□ -0.81
PtcraP0C6B2 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
PtcraP0C6B2 Gm42867-201ENSMUST00000202995 469 ntBASIC10.01□□□□□ -0.81
PtcraP0C6B2 Gm9445-201ENSMUST00000207454 1285 ntBASIC10.01□□□□□ -0.81
PtcraP0C6B2 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
PtcraP0C6B2 Gm45856-201ENSMUST00000212752 416 ntBASIC10.01□□□□□ -0.81
PtcraP0C6B2 AC159747.1-201ENSMUST00000219903 265 ntBASIC10.01□□□□□ -0.81
PtcraP0C6B2 AC102569.1-204ENSMUST00000222816 793 ntTSL 3 BASIC10.01□□□□□ -0.81
PtcraP0C6B2 Ginm1-202ENSMUST00000065124 300 ntBASIC10.01□□□□□ -0.81
PtcraP0C6B2 Olfr293-201ENSMUST00000081474 1011 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
PtcraP0C6B2 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
PtcraP0C6B2 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC10.01□□□□□ -0.81
PtcraP0C6B2 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
PtcraP0C6B2 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC10.01□□□□□ -0.81
PtcraP0C6B2 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
PtcraP0C6B2 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
PtcraP0C6B2 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
PtcraP0C6B2 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
PtcraP0C6B2 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
PtcraP0C6B2 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
PtcraP0C6B2 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
PtcraP0C6B2 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
PtcraP0C6B2 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC10.01□□□□□ -0.81
PtcraP0C6B2 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC10.01□□□□□ -0.81
PtcraP0C6B2 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC10.01□□□□□ -0.81
PtcraP0C6B2 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
PtcraP0C6B2 Eya1-209ENSMUST00000190337 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
PtcraP0C6B2 Btrc-209ENSMUST00000224478 2194 ntBASIC10.01□□□□□ -0.81
PtcraP0C6B2 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
PtcraP0C6B2 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
PtcraP0C6B2 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
PtcraP0C6B2 Olfr1415-202ENSMUST00000204009 2815 ntAPPRIS P1 TSL 3 BASIC10.01□□□□□ -0.81
PtcraP0C6B2 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
PtcraP0C6B2 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
PtcraP0C6B2 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
PtcraP0C6B2 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
PtcraP0C6B2 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
PtcraP0C6B2 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
PtcraP0C6B2 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC10□□□□□ -0.81
PtcraP0C6B2 Ap3b2-205ENSMUST00000152355 3168 ntTSL 1 (best) BASIC10□□□□□ -0.81
PtcraP0C6B2 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
PtcraP0C6B2 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
PtcraP0C6B2 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC10□□□□□ -0.81
PtcraP0C6B2 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC10□□□□□ -0.81
PtcraP0C6B2 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC10□□□□□ -0.81
PtcraP0C6B2 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
PtcraP0C6B2 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
PtcraP0C6B2 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
PtcraP0C6B2 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
PtcraP0C6B2 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
PtcraP0C6B2 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
PtcraP0C6B2 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
PtcraP0C6B2 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
PtcraP0C6B2 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC10□□□□□ -0.81
PtcraP0C6B2 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
PtcraP0C6B2 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC10□□□□□ -0.81
PtcraP0C6B2 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC10□□□□□ -0.81
PtcraP0C6B2 Gm4294-201ENSMUST00000105169 614 ntBASIC10□□□□□ -0.81
PtcraP0C6B2 Gm13045-201ENSMUST00000119019 712 ntBASIC10□□□□□ -0.81
PtcraP0C6B2 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC10□□□□□ -0.81
PtcraP0C6B2 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC10□□□□□ -0.81
PtcraP0C6B2 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC10□□□□□ -0.81
PtcraP0C6B2 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
PtcraP0C6B2 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC10□□□□□ -0.81
PtcraP0C6B2 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC10□□□□□ -0.81
PtcraP0C6B2 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC10□□□□□ -0.81
PtcraP0C6B2 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC10□□□□□ -0.81
PtcraP0C6B2 AC154634.3-201ENSMUST00000224589 736 ntBASIC10□□□□□ -0.81
PtcraP0C6B2 Olfr1212-201ENSMUST00000055895 936 ntAPPRIS P1 BASIC10□□□□□ -0.81
PtcraP0C6B2 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC10□□□□□ -0.81
PtcraP0C6B2 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC10□□□□□ -0.81
PtcraP0C6B2 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC10□□□□□ -0.81
PtcraP0C6B2 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
PtcraP0C6B2 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC10□□□□□ -0.81
PtcraP0C6B2 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms