Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Gm22903-201ENSMUST00000175193 102 ntBASIC14.78□□□□□ -0.04
Hoxc9P09633 Gm25070-201ENSMUST00000175237 102 ntBASIC14.78□□□□□ -0.04
Hoxc9P09633 Gm24159-201ENSMUST00000175264 102 ntBASIC14.78□□□□□ -0.04
Hoxc9P09633 Gm25299-201ENSMUST00000175283 102 ntBASIC14.78□□□□□ -0.04
Hoxc9P09633 Gm23798-201ENSMUST00000175560 102 ntBASIC14.78□□□□□ -0.04
Hoxc9P09633 Gm23802-201ENSMUST00000175565 102 ntBASIC14.78□□□□□ -0.04
Hoxc9P09633 Gm25708-201ENSMUST00000177687 102 ntBASIC14.78□□□□□ -0.04
Hoxc9P09633 Gm24370-201ENSMUST00000178007 102 ntBASIC14.78□□□□□ -0.04
Hoxc9P09633 Gm23049-201ENSMUST00000178068 102 ntBASIC14.78□□□□□ -0.04
Hoxc9P09633 Gm28019-201ENSMUST00000178138 101 ntBASIC14.78□□□□□ -0.04
Hoxc9P09633 Gm25571-201ENSMUST00000178322 102 ntBASIC14.78□□□□□ -0.04
Hoxc9P09633 Gm25355-201ENSMUST00000178456 101 ntBASIC14.78□□□□□ -0.04
Hoxc9P09633 Gm24975-201ENSMUST00000178492 101 ntBASIC14.78□□□□□ -0.04
Hoxc9P09633 Gm23189-201ENSMUST00000178954 102 ntBASIC14.78□□□□□ -0.04
Hoxc9P09633 Gm25100-201ENSMUST00000179750 101 ntBASIC14.78□□□□□ -0.04
Hoxc9P09633 Gm23064-201ENSMUST00000179866 101 ntBASIC14.78□□□□□ -0.04
Hoxc9P09633 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxc9P09633 Gm19927-201ENSMUST00000185792 781 ntBASIC14.78□□□□□ -0.04
Hoxc9P09633 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC14.78□□□□□ -0.04
Hoxc9P09633 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC14.78□□□□□ -0.04
Hoxc9P09633 BC106175-201ENSMUST00000218578 695 ntTSL 5 BASIC14.78□□□□□ -0.04
Hoxc9P09633 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC14.78□□□□□ -0.04
Hoxc9P09633 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxc9P09633 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxc9P09633 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxc9P09633 Gm10020-201ENSMUST00000081993 612 ntBASIC14.78□□□□□ -0.04
Hoxc9P09633 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxc9P09633 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxc9P09633 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxc9P09633 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
Hoxc9P09633 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxc9P09633 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxc9P09633 Nupl1-206ENSMUST00000225111 2936 ntBASIC14.78□□□□□ -0.04
Hoxc9P09633 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxc9P09633 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Hoxc9P09633 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxc9P09633 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxc9P09633 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxc9P09633 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxc9P09633 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hoxc9P09633 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hoxc9P09633 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hoxc9P09633 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hoxc9P09633 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hoxc9P09633 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Hoxc9P09633 Gm42499-201ENSMUST00000196193 1412 ntBASIC14.77□□□□□ -0.04
Hoxc9P09633 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Hoxc9P09633 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hoxc9P09633 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hoxc9P09633 Gm5822-201ENSMUST00000161562 1378 ntBASIC14.77□□□□□ -0.04
Hoxc9P09633 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Hoxc9P09633 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Hoxc9P09633 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hoxc9P09633 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hoxc9P09633 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Hoxc9P09633 Mup-ps29-201ENSMUST00000122281 202 ntBASIC14.77□□□□□ -0.05
Hoxc9P09633 Lrrc75aos2-202ENSMUST00000128647 1227 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Hoxc9P09633 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC14.77□□□□□ -0.05
Hoxc9P09633 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC14.77□□□□□ -0.05
Hoxc9P09633 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Hoxc9P09633 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Hoxc9P09633 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Hoxc9P09633 Gm37269-201ENSMUST00000193906 1891 ntBASIC14.77□□□□□ -0.05
Hoxc9P09633 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Hoxc9P09633 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC14.77□□□□□ -0.05
Hoxc9P09633 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Hoxc9P09633 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Hoxc9P09633 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
Hoxc9P09633 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Hoxc9P09633 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Hoxc9P09633 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Hoxc9P09633 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Hoxc9P09633 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Hoxc9P09633 Btrc-209ENSMUST00000224478 2194 ntBASIC14.77□□□□□ -0.05
Hoxc9P09633 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Hoxc9P09633 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Hoxc9P09633 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Hoxc9P09633 Gm44153-201ENSMUST00000204162 1580 ntBASIC14.77□□□□□ -0.05
Hoxc9P09633 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hoxc9P09633 Gm12159-201ENSMUST00000143869 1447 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Hoxc9P09633 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC14.76□□□□□ -0.05
Hoxc9P09633 Gm14005-209ENSMUST00000224993 1832 ntBASIC14.76□□□□□ -0.05
Hoxc9P09633 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hoxc9P09633 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Hoxc9P09633 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC14.76□□□□□ -0.05
Hoxc9P09633 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hoxc9P09633 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Hoxc9P09633 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Hoxc9P09633 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Hoxc9P09633 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC14.76□□□□□ -0.05
Hoxc9P09633 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Hoxc9P09633 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC14.76□□□□□ -0.05
Hoxc9P09633 Gm43969-201ENSMUST00000204833 535 ntBASIC14.76□□□□□ -0.05
Hoxc9P09633 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Hoxc9P09633 AC170997.1-201ENSMUST00000214554 1053 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Hoxc9P09633 AC162932.1-201ENSMUST00000219209 872 ntBASIC14.76□□□□□ -0.05
Hoxc9P09633 Triap1-201ENSMUST00000031508 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hoxc9P09633 Gm9758-201ENSMUST00000035980 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hoxc9P09633 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC14.76□□□□□ -0.05
Hoxc9P09633 Gm7589-201ENSMUST00000085631 534 ntBASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms