Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Hoxa3P02831 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Hoxa3P02831 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC9.65□□□□□ -0.86
Hoxa3P02831 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Hoxa3P02831 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Hoxa3P02831 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Hoxa3P02831 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Hoxa3P02831 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
Hoxa3P02831 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Hoxa3P02831 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Hoxa3P02831 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Hoxa3P02831 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Hoxa3P02831 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Hoxa3P02831 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Hoxa3P02831 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Hoxa3P02831 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Hoxa3P02831 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Hoxa3P02831 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Hoxa3P02831 Gm13888-201ENSMUST00000119148 422 ntBASIC9.65□□□□□ -0.86
Hoxa3P02831 Gm11836-201ENSMUST00000121022 441 ntBASIC9.65□□□□□ -0.86
Hoxa3P02831 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC9.65□□□□□ -0.86
Hoxa3P02831 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Hoxa3P02831 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC9.65□□□□□ -0.86
Hoxa3P02831 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC9.65□□□□□ -0.86
Hoxa3P02831 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Hoxa3P02831 Gm4654-201ENSMUST00000183305 982 ntBASIC9.65□□□□□ -0.86
Hoxa3P02831 Gm28937-201ENSMUST00000185413 695 ntBASIC9.65□□□□□ -0.86
Hoxa3P02831 Gm29400-201ENSMUST00000187208 695 ntBASIC9.65□□□□□ -0.86
Hoxa3P02831 Gm28662-201ENSMUST00000188446 695 ntBASIC9.65□□□□□ -0.86
Hoxa3P02831 Gm28251-201ENSMUST00000188835 695 ntBASIC9.65□□□□□ -0.86
Hoxa3P02831 Gm37318-201ENSMUST00000194325 695 ntBASIC9.65□□□□□ -0.86
Hoxa3P02831 Gm38017-201ENSMUST00000194768 695 ntBASIC9.65□□□□□ -0.86
Hoxa3P02831 Gm38151-201ENSMUST00000195085 289 ntBASIC9.65□□□□□ -0.86
Hoxa3P02831 Gm37287-201ENSMUST00000195449 695 ntBASIC9.65□□□□□ -0.86
Hoxa3P02831 Gm37793-201ENSMUST00000195548 695 ntBASIC9.65□□□□□ -0.86
Hoxa3P02831 Gm8365-201ENSMUST00000197334 648 ntBASIC9.65□□□□□ -0.86
Hoxa3P02831 Gm44270-201ENSMUST00000203084 1234 ntBASIC9.65□□□□□ -0.86
Hoxa3P02831 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC9.65□□□□□ -0.86
Hoxa3P02831 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC9.65□□□□□ -0.86
Hoxa3P02831 AC153505.1-201ENSMUST00000218819 1071 ntBASIC9.65□□□□□ -0.86
Hoxa3P02831 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Hoxa3P02831 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Hoxa3P02831 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Hoxa3P02831 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Hoxa3P02831 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Hoxa3P02831 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Hoxa3P02831 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Hoxa3P02831 CT009489.1-201ENSMUST00000227740 1893 ntBASIC9.65□□□□□ -0.86
Hoxa3P02831 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Hoxa3P02831 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Hoxa3P02831 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC9.65□□□□□ -0.86
Hoxa3P02831 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Hoxa3P02831 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Hoxa3P02831 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.87
Hoxa3P02831 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC9.65□□□□□ -0.87
Hoxa3P02831 AC154404.1-201ENSMUST00000223601 2077 ntBASIC9.65□□□□□ -0.87
Hoxa3P02831 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Hoxa3P02831 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC9.65□□□□□ -0.87
Hoxa3P02831 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC9.65□□□□□ -0.87
Hoxa3P02831 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC9.65□□□□□ -0.87
Hoxa3P02831 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Hoxa3P02831 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Hoxa3P02831 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Hoxa3P02831 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.87
Hoxa3P02831 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC9.65□□□□□ -0.87
Hoxa3P02831 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC9.64□□□□□ -0.87
Hoxa3P02831 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC9.64□□□□□ -0.87
Hoxa3P02831 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Hoxa3P02831 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Hoxa3P02831 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Hoxa3P02831 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC9.64□□□□□ -0.87
Hoxa3P02831 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Hoxa3P02831 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Hoxa3P02831 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC9.64□□□□□ -0.87
Hoxa3P02831 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Hoxa3P02831 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Hoxa3P02831 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Hoxa3P02831 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Hoxa3P02831 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Hoxa3P02831 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Hoxa3P02831 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Hoxa3P02831 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Hoxa3P02831 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Hoxa3P02831 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC9.64□□□□□ -0.87
Hoxa3P02831 Gm11783-201ENSMUST00000119549 885 ntBASIC9.64□□□□□ -0.87
Hoxa3P02831 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC9.64□□□□□ -0.87
Hoxa3P02831 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Hoxa3P02831 Gm3150-201ENSMUST00000166418 204 ntBASIC9.64□□□□□ -0.87
Hoxa3P02831 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC9.64□□□□□ -0.87
Hoxa3P02831 Gm23045-201ENSMUST00000175041 96 ntBASIC9.64□□□□□ -0.87
Hoxa3P02831 Gm37299-201ENSMUST00000193951 826 ntBASIC9.64□□□□□ -0.87
Hoxa3P02831 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Hoxa3P02831 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC9.64□□□□□ -0.87
Hoxa3P02831 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC9.64□□□□□ -0.87
Hoxa3P02831 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Hoxa3P02831 AC159103.1-201ENSMUST00000228325 429 ntBASIC9.64□□□□□ -0.87
Hoxa3P02831 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Hoxa3P02831 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Hoxa3P02831 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Hoxa3P02831 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms